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Protein Overview: gi|133778812, gi...

General Information:
Name(s) found: gi|8777373 [NCBI NR]
gi|66792680 [NCBI NR]
gi|62320322 [NCBI NR]
gi|15238970 [NCBI NR]
gi|133778812 [NCBI NR]
Description(s) found:
Found 15 descriptions.
SHOW ALL
  • gi|8777373|dbj|BAA96963.1| dermal glycoprotein precursor, extracellular-like [Arabidopsis thaliana] [NCBI NR]
  • gi|66792680|gb|AAY56442.1| At5g48430 [Arabidopsis thaliana] [NCBI NR]
  • gi|62320322|dbj|BAD94668.1| dermal glycoprotein precursor [Arabidopsis thaliana] [NCBI NR]
  • gi|15238970|ref|NP_199654.1| aspartic-type endopeptidase [Arabidopsis thaliana] [NCBI NR]
  • gi|133778812|gb|ABO38746.1| At5g48430 [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 406 amino acids

    Gene Ontology:
    Cellular Component: endomembrane system [IEA]
    Biological Process: proteolysis [IEA]
    Molecular Function: aspartic-type endopeptidase activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEKSLLVLCL ILFFTYSYVS ANYYPPKALV STVSKNTILP IFTFTLNTNQ EFFIHIGGPY  60
   61 LVRKCNDGLP RPIVPCGSPV CALTRRFTPH QCSLPSNKII NGVCACQATA FEPFQRICNS 120
  121 DQFTYGDLSI SSLKPISPSV TINNVYYLCI PQPFLVDFPP GVFGLAGLAP TALATWNQLT 180
  181 RPRLGLEKKF ALCLPSDENP LKKGAIYFGG GPYKLRNIDA RSMLSYTRLI TNPRKLNNYF 240
  241 LGLKGISVNG NRILFAPNAF AFDRNGDGGV TLSTIFPFTM LRSDIYRVFI EAFSQATSGI 300
  301 PRVSSTTPFE FCLSTTTNFQ VPRIDLELAN GVIWKLSPAN AMKKVSDDVA CLAFVNGGDA 360
  361 AAQAVMIGIH QMENTLVEFD VGRSAFGFSS SLGLVSASCG DFQTRP

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..406] PSI-BLAST 40.69897 Crystal Structure of the Triticum aestivum xylanase inhibitor I

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  1.01508543827677 bayes_pls_golite062009
  • hydrolase activity
    		•  0.77554493777157 bayes_pls_golite062009
  • peptidase activity
    		•  0.68518523369811 bayes_pls_golite062009
  • peptidase activity, acting on L-amino acid peptides
    		•  0.43925265235199 bayes_pls_golite062009
  • endopeptidase activity
    		•  0.43264884039584 bayes_pls_golite062009
  • aspartic-type endopeptidase activity
    		•  0.30585066730542 bayes_pls_golite062009
  • aspartic-type peptidase activity
    		•  0.30585066730542 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle