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Protein Overview: gi|12324510, gi|...

General Information:
Name(s) found: gi|67633420 [NCBI NR]
gi|15220922 [NCBI NR]
gi|12324510 [NCBI NR]
Description(s) found:
Found 12 descriptions.
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  • gi|67633420|gb|AAY78635.1| avirulence-responsive family protein [Arabidopsis thaliana] [NCBI NR]
  • gi|15220922|ref|NP_174657.1| avirulence-responsive family protein / avirulence induced gene (AIG1) family protein [Arabidopsis thaliana] [NCBI NR]
  • gi|12324510|gb|AAG52215.1|AC022288_14 AIG1-like protein; 11637-17773 [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 311 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: response to bacterium [ISS]
    Molecular Function: GTP binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNKGGAQQKG HSSKQAENIV LVGRTGNGKS ATGNSLIGKK VFASKAHASG VTMKCQTHGV  60
   61 VTKDGHKINV IDTPGLFDLS VSAEYISKEI VRCLTLAEGG IHAVLLVLSA RTRITQEEEN 120
  121 TLRTLQALFG SQILDYVVVV FTGGDVLEEC KETLEDYLGR DCPTFIKEVM RMSSNRKVVI 180
  181 DNKTHDEGKK AEQVHKLLSL VDDIRRSKCG EAYTDDTYHM IKEESEKLRK HHEELESKNY 240
  241 SEECAAEMKN QSLILYKENL KQMSEQLEKK LKDAAEAQEK ALSKMTQENN ELNLALKIHI 300
  301 PLPPITPCNI L

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..311] PSI-BLAST 38.0 Elongation factor Tu (EF-Tu), domain 2; Elongation factor Tu (EF-Tu); Elongation factor Tu (EF-Tu), N-terminal (G) domain

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.36550713198424 bayes_pls_golite062009
  • catalytic activity
    		•  0.234613562021476 bayes_pls_golite062009
  • nucleoside-triphosphatase activity
    		•  0.166100211611062 bayes_pls_golite062009
  • pyrophosphatase activity
    		•  0.159702441149605 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides
    		•  0.149170905385965 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
    		•  0.147838751017739 bayes_pls_golite062009
  • hydrolase activity
    		•  0.0436758932827116 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.96

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle