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Protein Overview: gi|7488090, gi|1...

General Information:
Name(s) found: gi|7488090 [NCBI NR]
gi|4335767 [NCBI NR]
gi|20197344 [NCBI NR]
gi|15227595 [NCBI NR]
Description(s) found:
Found 12 descriptions.
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  • pir||T02696 probable disease resistance protein [imported] - Arabidopsis thaliana [NCBI NR]
  • gi|4335767|gb|AAD17444.1| disease resistance protein (TIR class), putative [Arabidopsis thaliana] [NCBI NR]
  • gi|20197344|gb|AAM15034.1| disease resistance protein (TIR class), putative [Arabidopsis thaliana] [NCBI NR]
  • gi|15227595|ref|NP_178429.1| Toll-Interleukin-Resistance (TIR) domain-containing protein [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 203 amino acids

    Gene Ontology:
    Cellular Component: intrinsic to membrane [IEA]
    Biological Process: signal transduction [IEA]
    innate immune response [IEA]
    defense response [ISS]
    Molecular Function: transmembrane receptor activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTFFSPTQVF LNYRGEQLRR SFVSHLIDAF ERNEINFFVD KYEQRGKDLK NLFLRIQESK  60
   61 IALAIFSTRY TESSWCMDEL VKIKKLADKR KLHVIPIFYK VKVEDVRKQT GEFGDNFWTL 120
  121 AKVSSGDQIK KWKEALECIP NKMGLSLGDK SDEADFIKEV VKAVQCVVAT IGLEEEENHF 180
  181 GKKKRKDCKC ELPDLKKSRT KKL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..131] PSI-BLAST 5.39794 Toll-like receptor 1, TLR1
    2 View Details [132..203] MSA 18.178996 View MSA. No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.261666574457319 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle