YRC Logo
Descriptions Names[Advanced Search]

Protein Overview: RTL2_ARATH

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:


[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

New Feature: Upload Your Own Microscopy Data

No microscopy data found in the PDR for this protein.

Protein Structure Data

[What does the above image mean?]
[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#   Region(s) Method Confidence Match Description
1 View Details [1..303] PSI-BLAST 40.09691 RNase III endonuclease catalytic domain; RNase III, C-terminal domain
2 View Details [304..391] PSI-BLAST 16.045757 Solution structure of the second dsRBD of TAR RNA-binding protein 2

Functions predicted (by domain):

# Gene Ontology predictions
Term Confidence Notes
  • RNA binding
  • 2.103878681691 bayes_pls_golite062009
  • endoribonuclease activity
  • 2.02847548000256 bayes_pls_golite062009
  • endonuclease activity
  • 1.52328576888271 bayes_pls_golite062009
  • binding
  • 1.36306903445995 bayes_pls_golite062009
  • nucleic acid binding
  • 1.33734225890407 bayes_pls_golite062009
  • double-stranded RNA binding
  • 0.80785216315429 bayes_pls_golite062009
  • catalytic activity
  • 0.328884095744829 bayes_pls_golite062009
  • protein binding
  • 0.018276859224266 bayes_pls_golite062009
    2 No functions predicted.

    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle