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Protein Overview: CCB2_ARATH

General Information:
Name(s) found: CCB2_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|79330641|ref|NP_001032060.1| HCF208 (HIGH CHLOROPHYLL FLUORESCENCE 208) [Arabidopsis thaliana] [NCBI NR]
  • gi|15242277|ref|NP_200024.1| HCF208 (HIGH CHLOROPHYLL FLUORESCENCE 208) [Arabidopsis thaliana] [NCBI NR]
  • gi|117959001|gb|ABK59697.1| At5g52110 [Arabidopsis thaliana] [NCBI NR]
  • gi|10177746|dbj|BAB11059.1| unnamed protein product [Arabidopsis thaliana] [NCBI NR]
  • Protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic OS=Arabidopsis thaliana GN=CCB2 PE=1 SV=1 [Swiss-Prot]
  • (Q9FJ81) Genomic DNA, chromosome 5, P1 clone:MSG15 [athaliana3702.FASTAC.txt]
  • unnamed protein product [Arabidopsis thaliana]gi|15242277|ref|NP_200024.1| expressed protein [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Expressed protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: HCF208 | HCF208 (HIGH CHLOROPHYLL FLUORESCENCE 208) | chr5:21189879-21191179 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • | Symbols: HCF208 | HCF208 (HIGH CHLOROPHYLL FLUORESCENCE 208) | chr5:21189385-21191179 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • unknown protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • unnamed protein product [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • At5g52110 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: HCF208, CCB2 | Protein of unknown function (DUF2930) | chr5:21172653-21173953 REVERSE LENGTH=275 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • | Symbols: HCF208 | Protein of unknown function (DUF2930) | chr5:21172159-21173953 REVERSE LENGTH=275 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • At5g52110 OS=Arabidopsis thaliana GN=HCF208 PE=2 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 275 amino acids

    Gene Ontology:
    Cellular Component: chloroplast [IDA]
    Biological Process: cytochrome b6f complex assembly [IMP]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSIQICNFPF HPKFALQPRA QRSTRIFART ENDSPQSKTS DQQLNLSVLR FTFGIPGFDE  60
   61 SYLPRWIGYG FGSLLLLNHF SASAPISESQ MRSEALGLSL AAFSIALPYI GKFLKGSVVE 120
  121 QRSLPEEGEQ VFVISSNIGD SLKEDLAWAT YVLLRNTSTI AVLISVQGEL CVRGYWNCPD 180
  181 QMSKAQLHDW FKKKVDEIGL ADVKETLYFP QYAGSALSLD ILPDGTRSLF VQPLVQNTNE 240
  241 PQKVNGFLLV ASTAGYAYSD KDRAWIGAMA EKFRG

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..275] MSA 2.025964 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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