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View Structure Prediction Details

Protein: CCB2_ARATH
Organism: Arabidopsis thaliana
Length: 275 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CCB2_ARATH.

Description E-value Query
Range
Subject
Range
gi|78708929, gi|... - gi|78708929|gb|ABB47904.1| expressed protein [Oryza sativa (japonica cultivar-group)], gi|110289440|...
311.0 [0..44] [274..57]

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Predicted Domain #1
Region A:
Residues: [1-275]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSIQICNFPF HPKFALQPRA QRSTRIFART ENDSPQSKTS DQQLNLSVLR FTFGIPGFDE  60
   61 SYLPRWIGYG FGSLLLLNHF SASAPISESQ MRSEALGLSL AAFSIALPYI GKFLKGSVVE 120
  121 QRSLPEEGEQ VFVISSNIGD SLKEDLAWAT YVLLRNTSTI AVLISVQGEL CVRGYWNCPD 180
  181 QMSKAQLHDW FKKKVDEIGL ADVKETLYFP QYAGSALSLD ILPDGTRSLF VQPLVQNTNE 240
  241 PQKVNGFLLV ASTAGYAYSD KDRAWIGAMA EKFRG

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
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Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle