YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: LECT2_ARATH

General Information:
Name(s) found: LECT2_ARATH [Swiss-Prot]
Description(s) found:
Found 13 descriptions.
SHOW ALL
  • Lectin-like protein LEC OS=Arabidopsis thaliana GN=LEC PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 271 amino acids

    Gene Ontology:
    Cellular Component: cell wall [IDA]
    apoplast [IDA]
    Biological Process: defense response to fungus, incompatible interaction [IDA]
    Molecular Function: sugar binding [IEA]
    carbohydrate binding [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQIHKLCFLA LFLANAAFAV KFNFDSFDGS NLLFLGDAEL GPSSDGVSRS GALSMTRDET  60
   61 PFSHGQGLYI NPIQFKSSNT SSPFDFKTSF TFSITPRTKP NSGQGLAFVI VPAADNSGAS 120
  121 GGGYLGILNK TNDGKSENNL IFIEFDTFKN NESNDISGNH VGININSMTS LVAEKAGYWV 180
  181 QTLVGKRKVW SFKDVNLSSG ERFKAWIEFR SKDSRNTITI APENVKKPKR PLIQGSRVLN 240
  241 DVLLQNMYAG FAGSMGRAGE RHDVWSWSFE N

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..271] PSI-BLAST 63.30103 Phytohemagglutinin-L, PHA-L, also arcelin

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  1.49960529341364 bayes_pls_golite062009
  • sugar binding
    		•  1.2933880998245 bayes_pls_golite062009
  • monosaccharide binding
    		•  0.641323484799369 bayes_pls_golite062009
  • protein binding
    		•  0.501917973797597 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle