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View Structure Prediction Details

Protein: LECT2_ARATH
Organism: Arabidopsis thaliana
Length: 271 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for LECT2_ARATH.

Description E-value Query
Range
Subject
Range
gi|1418331, gi|1... - gi|1418331|emb|CAA65153.1| receptor like protein kinase [Arabidopsis thaliana], pir||T50661 receptor...
290.0 [0..15] [269..19]

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Predicted Domain #1
Region A:
Residues: [1-271]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQIHKLCFLA LFLANAAFAV KFNFDSFDGS NLLFLGDAEL GPSSDGVSRS GALSMTRDET  60
   61 PFSHGQGLYI NPIQFKSSNT SSPFDFKTSF TFSITPRTKP NSGQGLAFVI VPAADNSGAS 120
  121 GGGYLGILNK TNDGKSENNL IFIEFDTFKN NESNDISGNH VGININSMTS LVAEKAGYWV 180
  181 QTLVGKRKVW SFKDVNLSSG ERFKAWIEFR SKDSRNTITI APENVKKPKR PLIQGSRVLN 240
  241 DVLLQNMYAG FAGSMGRAGE RHDVWSWSFE N

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 63.30103
Match: 1fatA
Description: Phytohemagglutinin-L, PHA-L, also arcelin
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 1.49960529341364 bayes_pls_golite062009
sugar binding 1.2933880998245 bayes_pls_golite062009
monosaccharide binding 0.641323484799369 bayes_pls_golite062009
protein binding 0.501917973797597 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle