YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	LECT2_ARATH
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQIHKLCFLA LFLANAAFAV KFNFDSFDGS NLLFLGDAEL GPSSDGVSRS GALSMTRDET  60
   61 PFSHGQGLYI NPIQFKSSNT SSPFDFKTSF TFSITPRTKP NSGQGLAFVI VPAADNSGAS 120
  121 GGGYLGILNK TNDGKSENNL IFIEFDTFKN NESNDISGNH VGININSMTS LVAEKAGYWV 180
  181 QTLVGKRKVW SFKDVNLSSG ERFKAWIEFR SKDSRNTITI APENVKKPKR PLIQGSRVLN 240
  241 DVLLQNMYAG FAGSMGRAGE RHDVWSWSFE N

Type	Start	End	Confidence
Signal Peptide	1	19	0.99
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	271	0.99