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Protein Overview: GAOX1_ARATH

General Information:
Name(s) found: GAOX1_ARATH [Swiss-Prot]
Description(s) found:
Found 15 descriptions.
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  • Gibberellin 20 oxidase 1 OS=Arabidopsis thaliana GN=GA20OX1 PE=2 SV=2 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 377 amino acids

    Gene Ontology:
    Cellular Component: cytoplasm [TAS]
    Biological Process: response to gibberellin stimulus [IEP]
    unidimensional cell growth [IGI]
    flower development [IGI]
    short-day photoperiodism, flowering [IEP]
    gibberellin biosynthetic process [IDA][TAS]
    gibberellic acid mediated signaling pathway [TAS]
    Molecular Function: gibberellin 20-oxidase activity [IDA][TAS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAVSFVTTSP EEEDKPKLGL GNIQTPLIFN PSMLNLQANI PNQFIWPDDE KPSINVLELD  60
   61 VPLIDLQNLL SDPSSTLDAS RLISEACKKH GFFLVVNHGI SEELISDAHE YTSRFFDMPL 120
  121 SEKQRVLRKS GESVGYASSF TGRFSTKLPW KETLSFRFCD DMSRSKSVQD YFCDALGHGF 180
  181 QPFGKVYQEY CEAMSSLSLK IMELLGLSLG VKRDYFREFF EENDSIMRLN YYPPCIKPDL 240
  241 TLGTGPHCDP TSLTILHQDH VNGLQVFVEN QWRSIRPNPK AFVVNIGDTF MALSNDRYKS 300
  301 CLHRAVVNSE SERKSLAFFL CPKKDRVVTP PRELLDSITS RRYPDFTWSM FLEFTQKHYR 360
  361 ADMNTLQAFS DWLTKPI

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..377] PSI-BLAST 96.09691 The structure of ACC oxidase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  0.921320409505 bayes_pls_golite062009
  • binding
    		•  0.588242505102319 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.0678642854814351 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle