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Protein Overview: BXL6_ARATH

General Information:
Name(s) found: BXL6_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|7671447|emb|CAB89387.1| beta-xylosidase-like protein [Arabidopsis thaliana] [NCBI NR]
  • gi|15982753|gb|AAL09717.1| AT5g10560/F12B17_90 [Arabidopsis thaliana] [NCBI NR]
  • gi|15238197|ref|NP_196618.1| glycosyl hydrolase family 3 protein [Arabidopsis thaliana] [NCBI NR]
  • pir||T49983 beta-xylosidase-like protein - Arabidopsis thaliana [NCBI NR]
  • Probable beta-D-xylosidase 6 OS=Arabidopsis thaliana GN=BXL6 PE=2 SV=1 [Swiss-Prot]
  • (Q9LXA8) Beta-xylosidase-like protein (AT5g10560/F12B17_90) [athaliana3702.FASTAC.txt]
  • beta-xylosidase-like protein [Arabidopsis thaliana]gi|15982753|gb|AAL09717.1| AT5g10560/F12B17_90 [Arabidopsis thaliana]gi|11357198|pir||T49983 beta-xylosidase-like protein - Arabidopsis thalianagi|15238197|ref|NP_196618.1| glycosyl hydrolase family 3 [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Glycosyl hydrolase family 3 protein, beta-xylosidase, Aspergllus nidulans, EMBL:ANXLND [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | glycosyl hydrolase family 3 protein | chr5:3336336-3339352 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • beta-xylosidase-like protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • AT5g10560/F12B17_90 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | Glycosyl hydrolase family protein | chr5:3336335-3339351 REVERSE LENGTH=792 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 792 amino acids

    Gene Ontology:
    Cellular Component: vacuole [IDA]
    plasma membrane [IDA]
    Biological Process: carbohydrate metabolic process [IEA]
    Molecular Function: xylan 1,4-beta-xylosidase activity [TAS]
    hydrolase activity, hydrolyzing O-glycosyl compounds [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNLQLTLISL LFFTSAIAET FKNLDSHPQF PCKPPHFSSY PFCNVSLSIK QRAISLVSLL  60
   61 MLPEKIGQLS NTAASVPRLG IPPYEWWSES LHGLADNGPG VSFNGSISAA TSFPQVIVSA 120
  121 ASFNRTLWYE IGSAVAVEGR AMYNGGQAGL TFWAPNINVF RDPRWGRGQE TPGEDPKVVS 180
  181 EYGVEFVRGF QEKKKRKVLK RRFSDDVDDD RHDDDADGKL MLSACCKHFT AYDLEKWGNF 240
  241 TRYDFNAVVT EQDMEDTYQP PFETCIRDGK ASCLMCSYNA VNGVPACAQG DLLQKARVEW 300
  301 GFEGYITSDC DAVATIFAYQ GYTKSPEEAV ADAIKAGVDI NCGTYMLRHT QSAIEQGKVS 360
  361 EELVDRALLN LFAVQLRLGL FDGDPRRGQY GKLGSNDICS SDHRKLALEA TRQGIVLLKN 420
  421 DHKLLPLNKN HVSSLAIVGP MANNISNMGG TYTGKPCQRK TLFTELLEYV KKTSYASGCS 480
  481 DVSCDSDTGF GEAVAIAKGA DFVIVVAGLD LSQETEDKDR VSLSLPGKQK DLVSHVAAVS 540
  541 KKPVILVLTG GGPVDVTFAK NDPRIGSIIW IGYPGETGGQ ALAEIIFGDF NPGGRLPTTW 600
  601 YPESFTDVAM SDMHMRANSS RGYPGRTYRF YTGPQVYSFG TGLSYTKFEY KILSAPIRLS 660
  661 LSELLPQQSS HKKQLQHGEE LRYLQLDDVI VNSCESLRFN VRVHVSNTGE IDGSHVVMLF 720
  721 SKMPPVLSGV PEKQLIGYDR VHVRSNEMME TVFVIDPCKQ LSVANDVGKR VIPLGSHVLF 780
  781 LGDLQHSLSV EF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..645] PSI-BLAST 114.0 Beta-D-glucan exohydrolase, N-terminal domain; Beta-D-glucan exohydrolase, C-terminal domain
    2 View Details [646..792] FFAS03 1.63 Dex49A from Penicillium minioluteum

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • hydrolase activity, hydrolyzing O-glycosyl compounds
    		•  3.03213713925196 bayes_pls_golite062009
  • hydrolase activity, acting on glycosyl bonds
    		•  3.00088487541785 bayes_pls_golite062009
  • catalytic activity
    		•  1.85569074294201 bayes_pls_golite062009
  • hydrolase activity
    		•  1.15751720508639 bayes_pls_golite062009
  • chitinase activity
    		•  0.700083867878222 bayes_pls_golite062009
  • glucosidase activity
    		•  0.528679164808812 bayes_pls_golite062009
  • hexosaminidase activity
    		•  0.220458268933622 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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