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View Structure Prediction Details

Protein: BXL6_ARATH
Organism: Arabidopsis thaliana
Length: 792 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for BXL6_ARATH.

Description E-value Query
Range
Subject
Range
gi|18025342 - gi|18025342|gb|AAK38482.1| beta-D-xylosidase [Hordeum vulgare]
654.0 [0..25] [790..29]

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Predicted Domain #1
Region A:
Residues: [1-645]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNLQLTLISL LFFTSAIAET FKNLDSHPQF PCKPPHFSSY PFCNVSLSIK QRAISLVSLL  60
   61 MLPEKIGQLS NTAASVPRLG IPPYEWWSES LHGLADNGPG VSFNGSISAA TSFPQVIVSA 120
  121 ASFNRTLWYE IGSAVAVEGR AMYNGGQAGL TFWAPNINVF RDPRWGRGQE TPGEDPKVVS 180
  181 EYGVEFVRGF QEKKKRKVLK RRFSDDVDDD RHDDDADGKL MLSACCKHFT AYDLEKWGNF 240
  241 TRYDFNAVVT EQDMEDTYQP PFETCIRDGK ASCLMCSYNA VNGVPACAQG DLLQKARVEW 300
  301 GFEGYITSDC DAVATIFAYQ GYTKSPEEAV ADAIKAGVDI NCGTYMLRHT QSAIEQGKVS 360
  361 EELVDRALLN LFAVQLRLGL FDGDPRRGQY GKLGSNDICS SDHRKLALEA TRQGIVLLKN 420
  421 DHKLLPLNKN HVSSLAIVGP MANNISNMGG TYTGKPCQRK TLFTELLEYV KKTSYASGCS 480
  481 DVSCDSDTGF GEAVAIAKGA DFVIVVAGLD LSQETEDKDR VSLSLPGKQK DLVSHVAAVS 540
  541 KKPVILVLTG GGPVDVTFAK NDPRIGSIIW IGYPGETGGQ ALAEIIFGDF NPGGRLPTTW 600
  601 YPESFTDVAM SDMHMRANSS RGYPGRTYRF YTGPQVYSFG TGLSY

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 114.0
Match: 1ex1A
Description: Beta-D-glucan exohydrolase, N-terminal domain; Beta-D-glucan exohydrolase, C-terminal domain
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
hydrolase activity, hydrolyzing O-glycosyl compounds 3.03213713925196 bayes_pls_golite062009
hydrolase activity, acting on glycosyl bonds 3.00088487541785 bayes_pls_golite062009
catalytic activity 1.85569074294201 bayes_pls_golite062009
hydrolase activity 1.15751720508639 bayes_pls_golite062009
chitinase activity 0.700083867878222 bayes_pls_golite062009
glucosidase activity 0.528679164808812 bayes_pls_golite062009
hexosaminidase activity 0.220458268933622 bayes_pls_golite062009

Predicted Domain #2
Region A:
Residues: [646-792]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TKFEYKILSA PIRLSLSELL PQQSSHKKQL QHGEELRYLQ LDDVIVNSCE SLRFNVRVHV  60
   61 SNTGEIDGSH VVMLFSKMPP VLSGVPEKQL IGYDRVHVRS NEMMETVFVI DPCKQLSVAN 120
  121 DVGKRVIPLG SHVLFLGDLQ HSLSVEF

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.63
Match: 1ogmX
Description: Dex49A from Penicillium minioluteum
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
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