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Protein Overview: gi|25370559, gi|...

General Information:
Name(s) found: gi|25370559 [NCBI NR]
gi|15217793 [NCBI NR]
gi|11079526 [NCBI NR]
Description(s) found:
Found 11 descriptions.
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  • pir||G96612 probable disease resistance protein RPS4 F12K22.22 [imported] - Arabidopsis thaliana [NCBI NR]
  • gi|15217793|ref|NP_176094.1| Toll-Interleukin-Resistance (TIR) domain-containing protein [Arabidopsis thaliana] [NCBI NR]
  • gi|11079526|gb|AAG29236.1|AC079732_7 disease resistance protein RPS4, putative [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 158 amino acids

    Gene Ontology:
    Cellular Component: intrinsic to membrane [IEA]
    Biological Process: signal transduction [IEA]
    innate immune response [IEA]
    defense response [ISS]
    Molecular Function: transmembrane receptor activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTILSLANDD FHRVFLSFRG DQLRYSFVSH LLDAFERHGI LCFVDKDELR GKTMTNLFVR  60
   61 IKESKIALVI FSSRYAESSW CMDELVKMKK RADKGKLQVI PIFYKVRARD VRGQTGEFGE 120
  121 TFWALARTSR GDQIMEWKEA LECISNKMGL SLGDKRYS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..158] PSI-BLAST 21.0 Toll-like receptor 1, TLR1

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.261666574457319 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle