YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: gi|15224475, gi|...

General Information:
Name(s) found: gi|4755202 [NCBI NR]
gi|25290939 [NCBI NR]
gi|15224475 [NCBI NR]
Description(s) found:
SHOW ONLY BEST
  • gi|4755202|gb|AAD29069.1| putative phosphoribosylaminoimidazole carboxylase [Arabidopsis thaliana] [NCBI NR]
  • pir||D84465 hypothetical protein At2g05140 [imported] - Arabidopsis thaliana [NCBI NR]
  • gi|15224475|ref|NP_178587.1| phosphoribosylaminoimidazole carboxylase family protein / AIR carboxylase family protein [Arabidopsis thaliana] [NCBI NR]
  • (Q9SJ42) Putative phosphoribosylaminoimidazole carboxylase [athaliana3702.FASTAC.txt]
  • putative phosphoribosylaminoimidazole carboxylase [Arabidopsis thaliana]gi|15224475|ref|NP_178587.1| phosphoribosylaminoimidazole carboxylase family protein / AIR carboxylase family protein [Arabidopsis thaliana]gi|25290939|pir||D84465 hypothetical prot [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Phosphoribosylaminoimidazole carboxylase family protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | phosphoribosylaminoimidazole carboxylase family protein / AIR carboxylase family protein | chr2:1853932-1854900 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • putative phosphoribosylaminoimidazole carboxylase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • phosphoribosylaminoimidazole carboxylase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | phosphoribosylaminoimidazole carboxylase family protein / AIR carboxylase family protein | chr2:1853935-1854903 FORWARD LENGTH=162 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • Phosphoribosylaminoimidazole carboxylase-like protein OS=Arabidopsis thaliana GN=At2g05140 PE=4 SV=1 [ARATH-contam.fasta]
  • Phosphoribosylaminoimidazole carboxylase family protein / AIR carboxylase family protein OS=Arabidopsis thaliana GN=At2g05140 PE=3 SV=1 [ARATH.fasta.20160308]
    • Organism: Arabidopsis thaliana
    Length: 162 amino acids

    Gene Ontology:
    Cellular Component: phosphoribosylaminoimidazole carboxylase complex [IEA][ISS]
    Biological Process: 'de novo' IMP biosynthetic process [IEA][ISS]
    Molecular Function: phosphoribosylaminoimidazole carboxylase activity [IEA][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGSDTDLLVM KDAAKILDMF GVTHEVKIVS AHRTPEMMYT YATSAHSRGV QVIIAGAGGA  60
   61 AHLPGMVASL TPLPVIGVPV QATRLDGVDS LLSIVQMPRG VPVATVAINN ATNAALLAVR 120
  121 MLGISDNDLV SRMRQYQEDM RDENLNKGEK LETQGWESYL NQ

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..162] PSI-BLAST 64.0 N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE)

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • phosphoribosylaminoimidazole carboxylase activity
    		•  12.126616405613 bayes_pls_golite062009
  • carboxy-lyase activity
    		•  8.23768576957333 bayes_pls_golite062009
  • catalytic activity
    		•  1.94758748334979 bayes_pls_golite062009
  • carbon-carbon lyase activity
    		•  0.735133792277863 bayes_pls_golite062009
  • lyase activity
    		•  0.685887227538264 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle