YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|15224475, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.76
Topology Confidence:	0.55
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGSDTDLLVM KDAAKILDMF GVTHEVKIVS AHRTPEMMYT YATSAHSRGV QVIIAGAGGA  60
   61 AHLPGMVASL TPLPVIGVPV QATRLDGVDS LLSIVQMPRG VPVATVAINN ATNAALLAVR 120
  121 MLGISDNDLV SRMRQYQEDM RDENLNKGEK LETQGWESYL NQ

Type	Start	End	Confidence
Cytoplasmic	1	48	0.69
Transmembrane Helix	49	68	0.62
Non-Cytoplasmic	69	102	0.84
Transmembrane Helix	103	124	0.55
Cytoplasmic	125	162	0.61