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View Structure Prediction Details

Protein: gi|15224475, gi|...
Organism: Arabidopsis thaliana
Length: 162 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|15224475, gi|....

Description E-value Query
Range
Subject
Range
gi|17933427 - gi|17933427|gb|AAL48287.1|AF452495_1 aminoimidazole ribonucleotide carboxylase [Vigna unguiculata]
243.0 [0..1] [161..472]

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Predicted Domain #1
Region A:
Residues: [1-162]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGSDTDLLVM KDAAKILDMF GVTHEVKIVS AHRTPEMMYT YATSAHSRGV QVIIAGAGGA  60
   61 AHLPGMVASL TPLPVIGVPV QATRLDGVDS LLSIVQMPRG VPVATVAINN ATNAALLAVR 120
  121 MLGISDNDLV SRMRQYQEDM RDENLNKGEK LETQGWESYL NQ

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 64.0
Match: 1o4vA
Description: N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE)
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
phosphoribosylaminoimidazole carboxylase activity 12.126616405613 bayes_pls_golite062009
carboxy-lyase activity 8.23768576957333 bayes_pls_golite062009
catalytic activity 1.94758748334979 bayes_pls_golite062009
carbon-carbon lyase activity 0.735133792277863 bayes_pls_golite062009
lyase activity 0.685887227538264 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle