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Protein Overview: gi|12323398, gi|...

General Information:
Name(s) found: gi|25315960 [NCBI NR]
gi|15223977 [NCBI NR]
gi|12323398 [NCBI NR]
Description(s) found:
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  • pir||G96804 hypothetical protein T5M16.12 [imported] - Arabidopsis thaliana [NCBI NR]
  • gi|15223977|ref|NP_177877.1| O-methyltransferase family 2 protein [Arabidopsis thaliana] [NCBI NR]
  • gi|12323398|gb|AAG51679.1|AC010704_23 putative caffeic acid 3-O-methyltransferase; 46558-47944 [Arabidopsis thaliana] [NCBI NR]
  • (Q9CAQ3) Putative caffeic acid 3-O-methyltransferase [athaliana3702.FASTAC.txt]
  • putative caffeic acid 3-O-methyltransferase; 46558-47944 [Arabidopsis thaliana]gi|15223977|ref|NP_177877.1| O-methyltransferase family 2 protein [Arabidopsis thaliana]gi|25315960|pir||G96804 hypothetical protein T5M16.12 [imported] - Arabidopsis thalian [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 O-methyltransferase family 2 protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | O-methyltransferase family 2 protein | chr1:29140931-29142317 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • putative caffeic acid 3-O-methyltransferase; 46558-47944 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • O-methyltransferase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | O-methyltransferase family protein | chr1:29136037-29137423 FORWARD LENGTH=381 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • O-methyltransferase family protein OS=Arabidopsis thaliana GN=T5M16.12 PE=4 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 381 amino acids

    Gene Ontology:
    Cellular Component: cytosol [TAS]
    Biological Process: lignin biosynthetic process [ISS]
    Molecular Function: O-methyltransferase activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSNHLQDPLT TYPKPGLTKE EQEIDEKMVS LQAESIVNAV AFPMVLKAAL ELGVIDTIAA  60
   61 ASNGTWLSPS EIAVSLPNKP TNPEAPVLLD RMLRLLVSHS ILKCCMVESR ENGQTGKIER 120
  121 VYAAEPICKY FLKDSDGSGS LSSLLLLLHS QVILKTWTNL KDVILEGKDA FSSAHDMRLF 180
  181 EYISSDDQFS KLFHRAMSES STMVMKKVLE EYRGFEDVNT LVDVGGGIGT ILGLITSKYP 240
  241 HIKGVNFDLA QVLTQAPFYP GVKHVSGDMF IEVPKGDAIF MKWILHDWGD EDCIKILKNC 300
  301 WKSLPEKGKV IIVEMITPME PKPNDFSCNT VLGMDLLMLT QCSGGKERSL SQFENLAFAS 360
  361 GFLLCEIICL SYSYSVIEFH K

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..381] PSI-BLAST 81.30103 Caffeic acid/5-hydroxyferulic acid 3/5-O-methyltransferase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  0.723277178398499 bayes_pls_golite062009
  • transferase activity
    		•  0.64512166557639 bayes_pls_golite062009
  • transferase activity, transferring one-carbon groups
    		•  0.54403439349476 bayes_pls_golite062009
  • methyltransferase activity
    		•  0.54389223881989 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.4843036104266 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle