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Protein Overview: TET13_ARATH

General Information:
Name(s) found: TET13_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|4582432|gb|AAD24818.1| putative senescence-associated protein [Arabidopsis thaliana] [NCBI NR]
  • pir||H84452 probable senescence-associated protein [imported] - Arabidopsis thaliana [NCBI NR]
  • gi|15227713|ref|NP_178478.1| TET13 (TETRASPANIN13) [Arabidopsis thaliana] [NCBI NR]
  • Tetraspanin-13 OS=Arabidopsis thaliana GN=TET13 PE=3 SV=1 [Swiss-Prot]
  • (Q9SI56) Putative senescence-associated protein 5 [athaliana3702.FASTAC.txt]
  • putative senescence-associated protein [Arabidopsis thaliana]gi|25411037|pir||H84452 probable senescence-associated protein [imported] - Arabidopsis thalianagi|15227713|ref|NP_178478.1| senescence-associated family protein [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Senescence-associated family protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: TET13 | TET13 (TETRASPANIN13) | chr2:1173167-1174112 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • putative senescence-associated protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • unknown protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: TET13 | tetraspanin13 | chr2:1173170-1174115 FORWARD LENGTH=278 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 278 amino acids

    Gene Ontology:
    Cellular Component: integral to membrane [IEA]
    Biological Process: aging [ISS]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MARDKEDQNN ENPSIVQNMS FPFNTIFLIS SAIFLVTAAF WFVAVMTLHY RTDECNRFVT  60
   61 TPGIFISFSL LAMSLTGFYA AYFKSDCLFR IHFFIFFLWM FVVVSKAIFV IFLHKETNPR 120
  121 LFPGTKIYEF RYEDYSGWVS RLVIKDDEWY RTRRCLVKDN VCNRLNHKMP ASEFYQMNLT 180
  181 PIQSGCCKPP LSCGLNYEKP NNWTVSRYYN NLEVDCKRWN NSADTLCFDC DSCKAVIIAD 240
  241 VHNTSFSITV NIIHIIFSLC IGMTGWFAWL RILRESQK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..278] FFAS03 1.2 Acetylcholine receptor protein, beta chain

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • transporter activity
    		•  0.490530350426558 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  0.470369925890019 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  0.296558094949252 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
    		•  0.270278407554454 bayes_pls_golite062009
  • ion transmembrane transporter activity
    		•  0.236415535327918 bayes_pls_golite062009
  • channel activity
    		•  0.219732635042021 bayes_pls_golite062009
  • passive transmembrane transporter activity
    		•  0.219732635042021 bayes_pls_golite062009
  • binding
    		•  0.136398313410002 bayes_pls_golite062009
  • cation transmembrane transporter activity
    		•  0.0891259397854478 bayes_pls_golite062009
  • substrate-specific channel activity
    		•  0.0809952490788071 bayes_pls_golite062009
  • ion channel activity
    		•  0.0676313321342619 bayes_pls_golite062009
  • metal ion transmembrane transporter activity
    		•  0.00152349218944181 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle