YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: CLPP3_ARATH

General Information:
Name(s) found: CLPP3_ARATH [Swiss-Prot]
Description(s) found:
Found 17 descriptions.
SHOW ALL
  • ATP-dependent Clp protease proteolytic subunit 3, chloroplastic OS=Arabidopsis thaliana GN=CLPP3 PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 309 amino acids

    Gene Ontology:
    Cellular Component: chloroplast stroma [IDA]
    chloroplast [IDA]
    chloroplast envelope [IDA]
    chloroplast thylakoid [IDA]
    plastid stroma [IDA]
    chloroplastic endopeptidase Clp complex [IDA]
    Biological Process: proteolysis [IEA]
    Molecular Function: serine-type endopeptidase activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEMSLRLASS STSNPICLLN PGKNLNFPIR NHRIPKTSKP FCVRSSMSLS KPPRQTLSSN  60
   61 WDVSSFSIDS VAQSPSRLPS FEELDTTNML LRQRIVFLGS QVDDMTADLV ISQLLLLDAE 120
  121 DSERDITLFI NSPGGSITAG MGIYDAMKQC KADVSTVCLG LAASMGAFLL ASGSKGKRYC 180
  181 MPNSKVMIHQ PLGTAGGKAT EMSIRIREMM YHKIKLNKIF SRITGKPESE IESDTDRDNF 240
  241 LNPWEAKEYG LIDAVIDDGK PGLIAPIGDG TPPPKTKVWD LWKVEGTKKD NTNLPSERSM 300
  301 TQNGYAAIE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..309] PSI-BLAST 70.522879 Clp protease, ClpP subunit

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  1.46154163027498 bayes_pls_golite062009
  • CoA carboxylase activity
    		•  0.939626895227199 bayes_pls_golite062009
  • ligase activity, forming carbon-carbon bonds
    		•  0.860711153501883 bayes_pls_golite062009
  • acetyl-CoA carboxylase activity
    		•  0.764444938444292 bayes_pls_golite062009
  • hydrolase activity
    		•  0.534319520590169 bayes_pls_golite062009
  • ligase activity
    		•  0.394364519761538 bayes_pls_golite062009
  • enoyl-CoA hydratase activity
    		•  0.138211479653256 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.81

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle