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Protein Overview: SFH3_ARATH

General Information:
Name(s) found: SFH3_ARATH [Swiss-Prot]
Description(s) found:
Found 16 descriptions.
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  • Phosphatidylinositol/phosphatidylcholine transfer protein SFH3 OS=Arabidopsis thaliana GN=SFH3 PE=2 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 548 amino acids

    Gene Ontology:
    Cellular Component: intracellular [IEA]
    Biological Process: flower development [IDA]
    transport [ISS]
    Molecular Function: phosphatidylinositol transporter activity [IGI][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTDTMSAHMD RHNKLDYDGS EDEKKTKLCS LKKKAINASN KFKHSFTKRT RRNSRVMSVS  60
   61 IVDDIDLEEL QAVDAFRQAL ILDELLPSKH DDHHMMLRFL RARKFDLEKA KQMWTDMIHW 120
  121 RKEFGVDTIM EDFDFKEIDE VLKYYPQGYH GVDKDGRPVY IERLGQVDAT KLMQVTTIDR 180
  181 YVKYHVREFE KTFNIKLPAC SIAAKKHIDQ STTILDVQGV GLKSFSKAAR DLLQRIQKID 240
  241 SDNYPETLNR MFIINAGSGF RLLWSTVKSF LDPKTTAKIH VLGNKYQSKL LEIIDSNELP 300
  301 EFLGGNCTCA DKGGCMRSDK GPWNDPDIFK MVQNGEGKCP RKTLSNIEEK TISVDENTTM 360
  361 KSDSFAKNKF DAENTKFIPM IDKTVNASTW PTNLHKSNYP EPEDLYSAVK PSQRRGGEGY 420
  421 LFGGVMSLVM GLMTVVRLTK NMPRKLTEAA IYGGEVDKAE TTMVSNQEYM SMVKRMAELE 480
  481 EKCRSLDNQP AAFSPEKEQI LTAALSRVDE LELQLAQTKK TLEETMATQH VIMAYIDKKK 540
  541 KKKKFFGF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..353] PSI-BLAST 61.39794 PHOSPHATIDYLINOSITOL TRANSFER PROTEIN SEC14P FROM SACCHAROMYCES CEREVISIAE
    2 View Details [354..548] PSI-BLAST 21.045757 Solution structure of the MSP domain of RIKEN cDNA 6030424E15

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • phospholipid transporter activity
    		•  4.82372291869245 bayes_pls_golite062009
  • lipid transporter activity
    		•  3.98714900064429 bayes_pls_golite062009
  • phosphatidylinositol transporter activity
    		•  3.08477039249457 bayes_pls_golite062009
  • transporter activity
    		•  2.25865143268098 bayes_pls_golite062009
  • binding
    		•  2.07034659478808 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  1.84980732779905 bayes_pls_golite062009
  • retinoid binding
    		•  1.4508809653482 bayes_pls_golite062009
  • isoprenoid binding
    		•  1.32450443851017 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  1.14391953556505 bayes_pls_golite062009
  • vitamin binding
    		•  0.87942237566918 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
    		•  0.418179505285201 bayes_pls_golite062009
  • protein binding
    		•  0.408110742195811 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.265815679858875 bayes_pls_golite062009
    2
    Term Confidence Notes
  • binding
    		•  1.75457057183191 bayes_pls_golite062009
  • protein binding
    		•  1.01204479960373 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle