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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SFH3_ARATH
Protein type: Transmembrane
Type Confidence: 0.84
Topology Confidence: 0.79
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTDTMSAHMD RHNKLDYDGS EDEKKTKLCS LKKKAINASN KFKHSFTKRT RRNSRVMSVS  60
   61 IVDDIDLEEL QAVDAFRQAL ILDELLPSKH DDHHMMLRFL RARKFDLEKA KQMWTDMIHW 120
  121 RKEFGVDTIM EDFDFKEIDE VLKYYPQGYH GVDKDGRPVY IERLGQVDAT KLMQVTTIDR 180
  181 YVKYHVREFE KTFNIKLPAC SIAAKKHIDQ STTILDVQGV GLKSFSKAAR DLLQRIQKID 240
  241 SDNYPETLNR MFIINAGSGF RLLWSTVKSF LDPKTTAKIH VLGNKYQSKL LEIIDSNELP 300
  301 EFLGGNCTCA DKGGCMRSDK GPWNDPDIFK MVQNGEGKCP RKTLSNIEEK TISVDENTTM 360
  361 KSDSFAKNKF DAENTKFIPM IDKTVNASTW PTNLHKSNYP EPEDLYSAVK PSQRRGGEGY 420
  421 LFGGVMSLVM GLMTVVRLTK NMPRKLTEAA IYGGEVDKAE TTMVSNQEYM SMVKRMAELE 480
  481 EKCRSLDNQP AAFSPEKEQI LTAALSRVDE LELQLAQTKK TLEETMATQH VIMAYIDKKK 540
  541 KKKKFFGF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle