| Protein: | SFH3_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 548 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SFH3_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
485.0 | [0..2] | [548..14] |
|
Region A: Residues: [1-353] |
1 11 21 31 41 51
| | | | | |
1 MTDTMSAHMD RHNKLDYDGS EDEKKTKLCS LKKKAINASN KFKHSFTKRT RRNSRVMSVS 60
61 IVDDIDLEEL QAVDAFRQAL ILDELLPSKH DDHHMMLRFL RARKFDLEKA KQMWTDMIHW 120
121 RKEFGVDTIM EDFDFKEIDE VLKYYPQGYH GVDKDGRPVY IERLGQVDAT KLMQVTTIDR 180
181 YVKYHVREFE KTFNIKLPAC SIAAKKHIDQ STTILDVQGV GLKSFSKAAR DLLQRIQKID 240
241 SDNYPETLNR MFIINAGSGF RLLWSTVKSF LDPKTTAKIH VLGNKYQSKL LEIIDSNELP 300
301 EFLGGNCTCA DKGGCMRSDK GPWNDPDIFK MVQNGEGKCP RKTLSNIEEK TIS
|
| Detection Method: |  |
| Confidence: | 61.39794 |
| Match: | 1auaA |
| Description: | PHOSPHATIDYLINOSITOL TRANSFER PROTEIN SEC14P FROM SACCHAROMYCES CEREVISIAE |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| phospholipid transporter activity | 4.82372291869245 | bayes_pls_golite062009 |
| lipid transporter activity | 3.98714900064429 | bayes_pls_golite062009 |
| phosphatidylinositol transporter activity | 3.08477039249457 | bayes_pls_golite062009 |
| transporter activity | 2.25865143268098 | bayes_pls_golite062009 |
| binding | 2.07034659478808 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 1.84980732779905 | bayes_pls_golite062009 |
| retinoid binding | 1.4508809653482 | bayes_pls_golite062009 |
| isoprenoid binding | 1.32450443851017 | bayes_pls_golite062009 |
| transmembrane transporter activity | 1.14391953556505 | bayes_pls_golite062009 |
| vitamin binding | 0.87942237566918 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 0.418179505285201 | bayes_pls_golite062009 |
| protein binding | 0.408110742195811 | bayes_pls_golite062009 |
| transcription regulator activity | 0.265815679858875 | bayes_pls_golite062009 |
|
Region A: Residues: [354-548] |
1 11 21 31 41 51
| | | | | |
1 VDENTTMKSD SFAKNKFDAE NTKFIPMIDK TVNASTWPTN LHKSNYPEPE DLYSAVKPSQ 60
61 RRGGEGYLFG GVMSLVMGLM TVVRLTKNMP RKLTEAAIYG GEVDKAETTM VSNQEYMSMV 120
121 KRMAELEEKC RSLDNQPAAF SPEKEQILTA ALSRVDELEL QLAQTKKTLE ETMATQHVIM 180
181 AYIDKKKKKK KFFGF
|
| Detection Method: | |
| Confidence: | 21.045757 |
| Match: | 1wicA |
| Description: | Solution structure of the MSP domain of RIKEN cDNA 6030424E15 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 1.75457057183191 | bayes_pls_golite062009 |
| protein binding | 1.01204479960373 | bayes_pls_golite062009 |
