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Protein Overview: LRK13_ARATH

General Information:
Name(s) found: LRK13_ARATH [Swiss-Prot]
Description(s) found:
Found 13 descriptions.
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  • L-type lectin-domain containing receptor kinase I.3 OS=Arabidopsis thaliana GN=LECRK13 PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 664 amino acids

    Gene Ontology:
    Cellular Component: plasma membrane [IDA]
    Biological Process: NONE FOUND
    Molecular Function: kinase activity [ISS]
    transmembrane receptor protein serine/threonine kinase activity [IDA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MACRLYLALI FSCVYLICLS SQQETGFVYN GFEQADLFID GIAKILPDGL LQLTNTTELQ  60
   61 MGHAFFKKPF DFDPSSSLSF YTHFVCALVP PKLGADGGHG IVFVVSPSID LSHAYATQYL 120
  121 GVFSNLTNGT SSSHLLAIEL DTVKTVEFNE LEKPHVGIDL NSPISVESAL PSYFSNALGK 180
  181 NISINLLSGE PIQVWVDYDG SFLNVTLAPI EIKKPNQPLI SRAINLSEIF QEKMYVGFSS 240
  241 STGNLLSNHY ILGWSFSRRK EQLQSLNLST LPRVPLPKEE KKKLSPLLIG LVILLVIPVV 300
  301 MVLGGVYWYR RKKYAEVKEW WEKEYGPHRF SYKSLYKATN GFRKDCRVGK GGFGEVYKGT 360
  361 LPGGRHIAVK RLSHDAEQGM KQFVAEVVTM GNLQHRNLVP LLGYCRRKCE LLLVSEYMPN 420
  421 GSLDQYLFHE GNPSPSWYQR ISILKDIASA LSYLHTGTKQ VVLHRDIKAS NVMLDSEFNG 480
  481 RLGDFGMAKF HDRGTNLSAT AAVGTIGYMA PELITMGTSM KTDVYAFGAF LLEVICGRRP 540
  541 VEPELPVGKQ YLVKWVYECW KEACLFKTRD PRLGVEFLPE EVEMVLKLGL LCTNAMPESR 600
  601 PAMEQVVQYL NQDLPLPIFS PSTPGIGAFM PVSMEALSAI GVSSVRNSSV SMFVTHTILD 660
  661 GHGR

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..313] PSI-BLAST 31.30103 Legume lectin
    2 View Details [314..664] PSI-BLAST 70.154902 No description for 2qkwB was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  2.40096962515027 bayes_pls_golite062009
  • protein kinase activity
    		•  1.4419983524192 bayes_pls_golite062009
  • transferase activity, transferring phosphorus-containing groups
    		•  1.24960126056886 bayes_pls_golite062009
  • signal transducer activity
    		•  1.24423621131253 bayes_pls_golite062009
  • molecular transducer activity
    		•  1.24423621131253 bayes_pls_golite062009
  • phosphotransferase activity, alcohol group as acceptor
    		•  1.22297882223243 bayes_pls_golite062009
  • kinase activity
    		•  1.20198110006055 bayes_pls_golite062009
  • protein binding
    		•  0.757492117682468 bayes_pls_golite062009
  • transferase activity
    		•  0.634621009477606 bayes_pls_golite062009
  • receptor activity
    		•  0.376562682962271 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.372701974560119 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.339759264844777 bayes_pls_golite062009
  • transmembrane receptor activity
    		•  0.213382263378401 bayes_pls_golite062009
  • DNA binding
    		•  0.157628282318248 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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