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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: LRK13_ARATH
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.96
Topology Confidence: 0.69
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MACRLYLALI FSCVYLICLS SQQETGFVYN GFEQADLFID GIAKILPDGL LQLTNTTELQ  60
   61 MGHAFFKKPF DFDPSSSLSF YTHFVCALVP PKLGADGGHG IVFVVSPSID LSHAYATQYL 120
  121 GVFSNLTNGT SSSHLLAIEL DTVKTVEFNE LEKPHVGIDL NSPISVESAL PSYFSNALGK 180
  181 NISINLLSGE PIQVWVDYDG SFLNVTLAPI EIKKPNQPLI SRAINLSEIF QEKMYVGFSS 240
  241 STGNLLSNHY ILGWSFSRRK EQLQSLNLST LPRVPLPKEE KKKLSPLLIG LVILLVIPVV 300
  301 MVLGGVYWYR RKKYAEVKEW WEKEYGPHRF SYKSLYKATN GFRKDCRVGK GGFGEVYKGT 360
  361 LPGGRHIAVK RLSHDAEQGM KQFVAEVVTM GNLQHRNLVP LLGYCRRKCE LLLVSEYMPN 420
  421 GSLDQYLFHE GNPSPSWYQR ISILKDIASA LSYLHTGTKQ VVLHRDIKAS NVMLDSEFNG 480
  481 RLGDFGMAKF HDRGTNLSAT AAVGTIGYMA PELITMGTSM KTDVYAFGAF LLEVICGRRP 540
  541 VEPELPVGKQ YLVKWVYECW KEACLFKTRD PRLGVEFLPE EVEMVLKLGL LCTNAMPESR 600
  601 PAMEQVVQYL NQDLPLPIFS PSTPGIGAFM PVSMEALSAI GVSSVRNSSV SMFVTHTILD 660
  661 GHGR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle