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Protein Overview: gi|11346391, gi|...

General Information:
Name(s) found: gi|6522616 [NCBI NR]
gi|15231420 [NCBI NR]
gi|11346391 [NCBI NR]
Description(s) found:
Found 11 descriptions.
SHOW ALL
  • gi|6522616|emb|CAB62028.1| receptor-like protein kinase homolog [Arabidopsis thaliana] [NCBI NR]
  • gi|15231420|ref|NP_190221.1| leucine-rich repeat protein kinase, putative [Arabidopsis thaliana] [NCBI NR]
  • pir||T45694 receptor-like protein kinase homolog - Arabidopsis thaliana [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 793 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: transmembrane receptor protein tyrosine kinase signaling pathway [ISS]
    protein amino acid phosphorylation [IEA][ISS]
    Molecular Function: ATP binding [ISS]
    protein serine/threonine kinase activity [ISS]
    kinase activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRNCYNLSVH KETKYLIRVT SNYGNYDGRN EPPRFDLYLG PNFWVTIDLG KHVNGDTWKE  60
   61 IIHIPKSNSL DVCLIKTGTT TPIISTLELR SLPKYSYNAI SGSLKSTLRA FLSESTEVIR 120
  121 YPNDFYDRMW VPHFETEWKQ ISTNLKVNSS NGYLLPQDVL MTAAIPVNTS ARLSFTENLE 180
  181 FPHDELYLYF HFSEVQVLQA NQSREFSILW NGMVIYPDFI PDYLGAATVY NPSPSLCEVG 240
  241 KCLLELERTQ KSTLPPLLNA IEVFTVMNFP QSETNDDDVI AITKIKDTHR LNRTSWQGDP 300
  301 CVPQLFSWAG LSCIDTNVST PPRIISLNLS SSGLTGNIAT GIQNLTKLQK LDLSNNNLTG 360
  361 VVPEFLANMK SLLFIDLRKN KLNGSIPKTL LDRKKKGLQL FVDGDDDKGD DNKCLSGSCV 420
  421 PKMKFPLMIV ALAVSAVVVI AVVMILIFLF RKKKKSSLGI TSAAISEESI ETKRRRFTYS 480
  481 EVVEMTKNFQ KTLGEGGFGT VYYGNLNGSE QVAVKVLSQS SSQGYKHFKA EVELLLRVHH 540
  541 INLVSLVGYC DERNHLALIY ECMSNGDLKD HLSGKKGNAV LKWSTRLRIA VDAALGLEYL 600
  601 HYGCRPSIVH RDVKSTNILL DDQLMAKIAD FGLSRSFKLG EESQASTVVA GTLGYLDPEY 660
  661 YRTCRLAEMS DVYSFGILLL EIITNQNVID HAREKAHITE WVGLVLKGGD VTRIVDPNLD 720
  721 GEYNSRSVWR ALELAMSCAN PSSEHRPIMS QVVIDLKECL NTENSMKIKK NDTDNDGSLE 780
  781 LSSSDTEAVP CAR

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..344] PSI-BLAST 20.69897 No description for 2omuA was found.
    2 View Details [345..460] FFAS03 2.76 Polygalacturonase inhibiting protein PGIP
    3 View Details [461..793] PSI-BLAST 62.69897 No description for 2qkwB was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • signal transducer activity
    		•  2.54176035045352 bayes_pls_golite062009
  • molecular transducer activity
    		•  2.54176035045352 bayes_pls_golite062009
  • receptor activity
    		•  2.44108148686445 bayes_pls_golite062009
  • transmembrane receptor activity
    		•  2.25077658159974 bayes_pls_golite062009
  • binding
    		•  1.87302803330255 bayes_pls_golite062009
  • protein kinase activity
    		•  1.43632437878638 bayes_pls_golite062009
  • phosphotransferase activity, alcohol group as acceptor
    		•  1.16530645523007 bayes_pls_golite062009
  • transferase activity, transferring phosphorus-containing groups
    		•  1.12585418084562 bayes_pls_golite062009
  • kinase activity
    		•  1.11577341189523 bayes_pls_golite062009
  • G-protein coupled receptor activity
    		•  1.04507575991279 bayes_pls_golite062009
  • protein binding
    		•  0.646159692466759 bayes_pls_golite062009
  • transferase activity
    		•  0.435331931559158 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.370391722473665 bayes_pls_golite062009
  • protein tyrosine kinase activity
    		•  0.231213253402712 bayes_pls_golite062009
  • enzyme regulator activity
    		•  0.154501444195573 bayes_pls_golite062009
    2 No functions predicted.
    3 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
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