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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|11346391, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.79
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRNCYNLSVH KETKYLIRVT SNYGNYDGRN EPPRFDLYLG PNFWVTIDLG KHVNGDTWKE  60
   61 IIHIPKSNSL DVCLIKTGTT TPIISTLELR SLPKYSYNAI SGSLKSTLRA FLSESTEVIR 120
  121 YPNDFYDRMW VPHFETEWKQ ISTNLKVNSS NGYLLPQDVL MTAAIPVNTS ARLSFTENLE 180
  181 FPHDELYLYF HFSEVQVLQA NQSREFSILW NGMVIYPDFI PDYLGAATVY NPSPSLCEVG 240
  241 KCLLELERTQ KSTLPPLLNA IEVFTVMNFP QSETNDDDVI AITKIKDTHR LNRTSWQGDP 300
  301 CVPQLFSWAG LSCIDTNVST PPRIISLNLS SSGLTGNIAT GIQNLTKLQK LDLSNNNLTG 360
  361 VVPEFLANMK SLLFIDLRKN KLNGSIPKTL LDRKKKGLQL FVDGDDDKGD DNKCLSGSCV 420
  421 PKMKFPLMIV ALAVSAVVVI AVVMILIFLF RKKKKSSLGI TSAAISEESI ETKRRRFTYS 480
  481 EVVEMTKNFQ KTLGEGGFGT VYYGNLNGSE QVAVKVLSQS SSQGYKHFKA EVELLLRVHH 540
  541 INLVSLVGYC DERNHLALIY ECMSNGDLKD HLSGKKGNAV LKWSTRLRIA VDAALGLEYL 600
  601 HYGCRPSIVH RDVKSTNILL DDQLMAKIAD FGLSRSFKLG EESQASTVVA GTLGYLDPEY 660
  661 YRTCRLAEMS DVYSFGILLL EIITNQNVID HAREKAHITE WVGLVLKGGD VTRIVDPNLD 720
  721 GEYNSRSVWR ALELAMSCAN PSSEHRPIMS QVVIDLKECL NTENSMKIKK NDTDNDGSLE 780
  781 LSSSDTEAVP CAR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle