YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: gi|15238209, gi|...

General Information:
Name(s) found: gi|15238209 [NCBI NR]
gi|10177372 [NCBI NR]
Description(s) found:
SHOW ONLY BEST
  • gi|15238209|ref|NP_199003.1| POLA3/POLA4; DNA primase [Arabidopsis thaliana] [NCBI NR]
  • gi|10177372|dbj|BAB10663.1| DNA polymerase alpha subunit IV (primase)-like protein [Arabidopsis thaliana] [NCBI NR]
  • (Q9FJ26) DNA polymerase alpha subunit IV (Primase)-like protein [athaliana3702.FASTAC.txt]
  • DNA polymerase alpha subunit IV (primase)-like protein [Arabidopsis thaliana]gi|15238209|ref|NP_199003.1| DNA primase small subunit family [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 DNA primase small subunit family [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: POLA3, POLA4 | POLA3/POLA4; DNA primase | chr5:16778299-16781011 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • DNA polymerase alpha subunit IV (primase)-like protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • DNA primase [Arabidopsis thaliana] [nr-271106-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 407 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: DNA replication [ISS]
    DNA replication, synthesis of RNA primer [IEA]
    Molecular Function: DNA primase activity [IEA][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTREETETSG EDMMIDDPKP KIENDFNVHY LRIYYDGKHP GCDEYYFGRR EFSFTLENDV  60
   61 YLRYKSFKNA SLMEAAIKSN FPYKIDIGAV YSVDPDKRHA YAQSGTNLFT PVERELVFDI 120
  121 DITDYDDVRY CCSGADVCSK CWPLMTVAIK VIDTSLREDF GFKHILWVFS GRRGVHCWVC 180
  181 DAKARRLTNE QRSAVAEYFR VYKGNENNAK KVDLMGHSLH PFLARSYVDF IKSFFEGELQ 240
  241 ATQSIFSSKE KYEKILGMIT DEDIQADLRG KWENSARSSL SEEATSLLRW EQLKKALQSK 300
  301 RNKALSLRTC VEEIVFTFTY PRIDLEVSKQ MNHLLKAPFC VHPKTGRVCV PIDPNNCDEF 360
  361 DPLAVPTLSQ LIEEINSGGL RMDVDDDGMF SNRISVELFW IRVYYHS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..407] PSI-BLAST 67.09691 Crystal structure of DNA primase from Pyrococcus horikoshii


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle