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View Structure Prediction Details

Protein: gi|15238209, gi|...
Organism: Arabidopsis thaliana
Length: 407 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|15238209, gi|....

Description E-value Query
Range
Subject
Range
gi|40744428, gi|... - gi|67525151|ref|XP_660637.1| hypothetical protein AN3033.2 [Aspergillus nidulans FGSC A4], ref|XP_40...
483.0 [0..7] [403..71]

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Predicted Domain #1
Region A:
Residues: [1-407]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTREETETSG EDMMIDDPKP KIENDFNVHY LRIYYDGKHP GCDEYYFGRR EFSFTLENDV  60
   61 YLRYKSFKNA SLMEAAIKSN FPYKIDIGAV YSVDPDKRHA YAQSGTNLFT PVERELVFDI 120
  121 DITDYDDVRY CCSGADVCSK CWPLMTVAIK VIDTSLREDF GFKHILWVFS GRRGVHCWVC 180
  181 DAKARRLTNE QRSAVAEYFR VYKGNENNAK KVDLMGHSLH PFLARSYVDF IKSFFEGELQ 240
  241 ATQSIFSSKE KYEKILGMIT DEDIQADLRG KWENSARSSL SEEATSLLRW EQLKKALQSK 300
  301 RNKALSLRTC VEEIVFTFTY PRIDLEVSKQ MNHLLKAPFC VHPKTGRVCV PIDPNNCDEF 360
  361 DPLAVPTLSQ LIEEINSGGL RMDVDDDGMF SNRISVELFW IRVYYHS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 67.09691
Match: 1v33A
Description: Crystal structure of DNA primase from Pyrococcus horikoshii
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle