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Protein Overview: gi|25289339, gi|...

General Information:
Name(s) found: gi|9857532 [NCBI NR]
gi|48310410 [NCBI NR]
gi|46931226 [NCBI NR]
gi|25289339 [NCBI NR]
gi|15217733 [NCBI NR]
Description(s) found:
Found 14 descriptions.
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  • gi|9857532|gb|AAG00887.1|AC064879_5 Putative chitinase [Arabidopsis thaliana] [NCBI NR]
  • gi|48310410|gb|AAT41815.1| At1g02360 [Arabidopsis thaliana] [NCBI NR]
  • gi|46931226|gb|AAT06417.1| At1g02360 [Arabidopsis thaliana] [NCBI NR]
  • pir||H86153 probable chitinase [imported] - Arabidopsis thaliana [NCBI NR]
  • gi|15217733|ref|NP_171738.1| chitinase, putative [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 272 amino acids

    Gene Ontology:
    Cellular Component: endomembrane system [IEA]
    Biological Process: cell wall macromolecule catabolic process [IEA]
    Molecular Function: chitinase activity [IEA][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAQQHSFLLL CFFLSISYLL SSAQTEATSI ERLVPRDLYN KIFIHKDNTA CPANGFYTYE  60
   61 SFVQATRRFP RFGSVGSPVT QRLEVAAFLA QISHETTGGW ATAPDGPYAW GLCFKEEVSP 120
  121 QSTYCDSSDT QWPCFPNKTY QGRGPIQLSW NYNYGPAGRA LGFDGLRNPE TVSNNSVIAF 180
  181 QTALWFWMTP QSPKPSCHDV MIGKYRPTAA DLAANRTGGF GLTTNIINGG LECGIPGDGR 240
  241 VNDRIGFFQR YTGLFKVATG PNLDCENQRP YA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..272] PSI-BLAST 100.0 Plant class II chitinase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • lysozyme activity
    		•  2.92895503832101 bayes_pls_golite062009
  • penicillin binding
    		•  2.44231807818811 bayes_pls_golite062009
  • drug binding
    		•  1.77851370221726 bayes_pls_golite062009
  • catalytic activity
    		•  1.5828442141425 bayes_pls_golite062009
  • hydrolase activity
    		•  1.0005515375935 bayes_pls_golite062009
  • peptidase activity
    		•  0.99509553702915 bayes_pls_golite062009
  • hydrolase activity, hydrolyzing O-glycosyl compounds
    		•  0.94182556637438 bayes_pls_golite062009
  • hydrolase activity, acting on glycosyl bonds
    		•  0.802430198491011 bayes_pls_golite062009
  • chitin binding
    		•  0.753839992662669 bayes_pls_golite062009
  • binding
    		•  0.129196467957322 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle