YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|25289339, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAQQHSFLLL CFFLSISYLL SSAQTEATSI ERLVPRDLYN KIFIHKDNTA CPANGFYTYE  60
   61 SFVQATRRFP RFGSVGSPVT QRLEVAAFLA QISHETTGGW ATAPDGPYAW GLCFKEEVSP 120
  121 QSTYCDSSDT QWPCFPNKTY QGRGPIQLSW NYNYGPAGRA LGFDGLRNPE TVSNNSVIAF 180
  181 QTALWFWMTP QSPKPSCHDV MIGKYRPTAA DLAANRTGGF GLTTNIINGG LECGIPGDGR 240
  241 VNDRIGFFQR YTGLFKVATG PNLDCENQRP YA

Type	Start	End	Confidence
Signal Peptide	1	25	0.96
N-region	1	16
H-region	17	22
C-region	23	25
Cleavage Site	25	26
Non-Cytoplasmic	26	272	0.99