Protein Overview: gi|169153944, gi...

General Information:
Name(s) found:	gi\|187608350 [NCBI NR] gi\|169154007 [NCBI NR] gi\|169153944 [NCBI NR] gi\|125807083 [NCBI NR]
Description(s) found: SHOW ONLY BEST	gi\|187608350\|ref\|NP_001119860.1\| DNA ligase I [Danio rerio] [NCBI NR] gi\|169154007\|emb\|CAQ15121.1\| novel protein similar to H.sapiens LIG1, ligase I, DNA, ATP-dependent (LIG1) [Danio rerio] [NCBI NR] gi\|169153944\|emb\|CAQ14309.1\| novel protein similar to H.sapiens LIG1, ligase I, DNA, ATP-dependent (LIG1) [Danio rerio] [NCBI NR] gi\|125807083\|ref\|XP_685041.2\| PREDICTED: similar to ligase I [Danio rerio] [NCBI NR] DNA ligase (ATP) 1 [Danio rerio] [NCBI-RefSeq_Human_na_04-23-2010_reversed.fasta] DNA ligase 1 [Danio rerio] [NCBI-RefSeq_D_rerio_na_08-30-2010_reversed.fasta] DNA ligase OS=Danio rerio GN=si:dkeyp-35b8.5 PE=3 SV=1 [uniprot-Danio-rerio-zebrafish-April2015-contam.fasta] DNA ligase OS=Danio rerio GN=lig1 PE=1 SV=1 [DANRE.fasta.20160308]
Organism:	Danio rerio
Length:	1058 amino acids
Gene Ontology:
Cellular Component:	NONE FOUND
Biological Process:	DNA repair [IEA] DNA replication [IEA] DNA recombination [IEA] auxin biosynthetic process [IEA] response to DNA damage stimulus [IEA]
Molecular Function:	nucleotide binding [IEA] ATP binding [IEA] DNA binding [IEA] DNA ligase (ATP) activity [IEA] ligase activity [IEA]

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQRSIASFFQ PMKGKEKSDG QAKGKPGPVK SPLKIQNGVQ ESDSPIKKVH KRSRAILDSD  60
   61 EEDGDQPMVK EQEPKQSEVQ TVKKEKISDV KTAEVTKASS TPVSPKSPKT PTTPVTSSTS 120
  121 VSVVTPASSG TPGTPATPTS VSPSGIPKRK TARKQFPKRK LESRSDGEEL KEEEKEVDGG 180
  181 QESKRARVDS SPEQTENEMM EVDETSADEK TAVEEKEDKA KTSVVVDSEM KDEDDKKQKI 240
  241 NTNNEAKEKD KNESKQEEKI DTEKETKEKD KKINKQQEKK ETKKETKEKD KSDKKQEEKD 300
  301 KSDKKQEEKD KTEEKVNGEN EKEKIPDKKG KESSSPEKVV KKEKDTDGGS AKKKPISSFF 360
  361 APRKAAVKLE KEERNEGEKK KDGETSDVVE QKEKKSEKGV DSAVQSQYDP SRAHYHPIDH 420
  421 ACWKKGQKVP YLAVARTFEK IEEDSGRLKN IETLSNFLRS VILLSPDDLL CCVYLCLNQL 480
  481 GPAYQGLELG IGETVLMKAV AQATGRQLDK IKAEAQEKGD LGLVAESSRS NQRMMFAPAN 540
  541 LTAGGVFNKL KEIAHMSGNS AMNKKIDIIK GLFVACRFSE ARYIVRSLAG KLRIGLAEQS 600
  601 VLAALSQAVC LTPPGQEFPP AVLDAGKGMS TENRRVFLEE KALILKQTYC EMPNYDAIIP 660
  661 VLLKEGIDEL PNHCKLTPGV PLRPMLAHPT KGVGEVMKRF DEASFTCEYK YDGERAQIHI 720
  721 LENGEVRIFS RNQEDNTSKY PDIISRIPQV KKESVRSCVL DSEAVAWDRE KKQIQPFQVL 780
  781 TTRKRKDVDA SEIKVQVCVY AFDLLYLNGE SLVREPLSKR RALLRESFVE KEGEFVFARS 840
  841 LDADNTETIA EFLEQSVRDS CEGLMVKTLE KHATYEIAKR SHNWLKLKKD YLEGVGDTVD 900
  901 LCVIGAYLGK GKRAGGYGGF LLACYDEENE EFQSVCKIGT GFKDEDLEQH YNFLKEHILP 960
  961 KPRPYYRVDQ SAEPDVWLEA VQVWEVKCAD LSLSPVYKAA MGLVDPEKGI SLRFPRFLRI1020
 1021 RDDKKPEDAT TGSQIADLYK KQQQIQNQGD KPDLEDYY

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Protein predicted to be:	GLOBULAR (No transmembrane regions or signal peptide)
Confidence of classification:	0.99

Protein Overview: gi|169153944, gi...

Protein Complex Data

Mass Spectrometry Data

Yeast Two-Hybrid Data

Microscopy / Localization Data

Protein Structure Data

Philius Transmembrane Prediction: