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Protein Overview: RR9_ARATH

General Information:
Name(s) found: RR9_ARATH [Swiss-Prot]
Description(s) found:
Found 38 descriptions.
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  • 30S ribosomal protein S9, chloroplastic OS=Arabidopsis thaliana GN=RPS9 PE=2 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 208 amino acids

    Gene Ontology:
    Cellular Component: chloroplast stroma [IDA]
    chloroplast [IDA]
    cytosolic small ribosomal subunit [ISS]
    membrane [IDA]
    chloroplast envelope [IDA]
    plastid small ribosomal subunit [IDA]
    Biological Process: translation [ISS][TAS]
    Molecular Function: structural constituent of ribosome [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASITNLASS LSSLSFSSQV SQRPNTISFP RANSVFALPA KSARRASLSI TATVSAPPEE  60
   61 EEIVELKKYV KSRLPGGFAA QKIIGTGRRK CAIARVVLQE GTGKVIINYR DAKEYLQGNP 120
  121 LWLQYVKVPL VTLGYENSYD IFVKAHGGGL SGQAQAITLG VARALLKVSA DHRSPLKKEG 180
  181 LLTRDARVVE RKKAGLKKAR KAPQFSKR

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..208] PSI-BLAST 48.0 No description for 1vs5I was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • structural constituent of ribosome
    		•  7.32829196949019 bayes_pls_golite062009
  • structural molecule activity
    		•  6.75880680396215 bayes_pls_golite062009
  • 3'-5'-exoribonuclease activity
    		•  1.56111033008721 bayes_pls_golite062009
  • RNA binding
    		•  1.40868766468494 bayes_pls_golite062009
  • exoribonuclease activity, producing 5'-phosphomonoesters
    		•  1.35935222635763 bayes_pls_golite062009
  • exoribonuclease activity
    		•  1.31205157616894 bayes_pls_golite062009
  • 3'-5' exonuclease activity
    		•  1.10842504252923 bayes_pls_golite062009
  • catalytic activity
    		•  0.878454819018611 bayes_pls_golite062009
  • binding
    		•  0.478154009944658 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.475563727785465 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.229159987045404 bayes_pls_golite062009
  • mRNA binding
    		•  0.0491645692672305 bayes_pls_golite062009
  • transferase activity, transferring phosphorus-containing groups
    		•  6.9430052008157E-5 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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