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Protein Overview: JAL1_ARATH

General Information:
Name(s) found: JAL1_ARATH [Swiss-Prot]
Description(s) found:
Found 14 descriptions.
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  • Protein RESTRICTED TEV MOVEMENT 1 OS=Arabidopsis thaliana GN=RTM1 PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 174 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: response to virus [IMP]
    Molecular Function: sugar binding [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKIGPVGKHD ARSTTIVNWD EGSHDGFISQ IFLSHGVAGI MSIQFQFVMD GKLVLSDRHG  60
   61 PFSGNMFDVI ELNYPHEYIT GISGEYYKYE ANNPHMRSLK FNTNTSEYGP FGTSGSSNDK 120
  121 FAFKLGKSPQ FGGFHGTYDA SGLQYIGVYL RPKTVLPKID TGNAEETESK IVLG

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..174] PSI-BLAST 31.69897 Structure of a mannose-specific jacalin-related lectin from Morus nigra


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.63

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle