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View Structure Prediction Details

Protein: JAL1_ARATH
Organism: Arabidopsis thaliana
Length: 174 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for JAL1_ARATH.

Description E-value Query
Range
Subject
Range
gi|13877529, gi|... - gi|17978785|gb|AAL47386.1| unknown protein [Arabidopsis thaliana], gi|13877529|gb|AAK43842.1|AF37046...
179.0 [0..1] [174..1]

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Predicted Domain #1
Region A:
Residues: [1-174]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKIGPVGKHD ARSTTIVNWD EGSHDGFISQ IFLSHGVAGI MSIQFQFVMD GKLVLSDRHG  60
   61 PFSGNMFDVI ELNYPHEYIT GISGEYYKYE ANNPHMRSLK FNTNTSEYGP FGTSGSSNDK 120
  121 FAFKLGKSPQ FGGFHGTYDA SGLQYIGVYL RPKTVLPKID TGNAEETESK IVLG

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 31.69897
Match: 1xxqA
Description: Structure of a mannose-specific jacalin-related lectin from Morus nigra
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle