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Protein Overview: FK172_ARATH

General Information:
Name(s) found: FK172_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|9719731|gb|AAF97833.1|AC034107_16 Contains weak similarity to immunophilin FKBP46 from Spodoptera frugiperda gb|U15038 and contains a FKBP-type peptidyl-prolyl cis-trans isomerase PF|00254 domain. ESTs gb|T42383, gb|N38271, gb|R90399, gb|AA605386, gb| [NCBI NR]
  • gi|8671768|gb|AAF78374.1|AC069551_7 T10O22.14 [Arabidopsis thaliana] [NCBI NR]
  • gi|75173867|sp|Q9LDY5.1|FKBP5_ARATH RecName: Full=Probable FKBP-type peptidyl-prolyl cis-trans isomerase 5, chloroplastic; Short=PPIase; Short=Rotamase; Flags: Precursor [NCBI NR]
  • gi|21593730|gb|AAM65697.1| putative FK506-binding protein [Arabidopsis thaliana] [NCBI NR]
  • gi|18394580|ref|NP_564048.1| immunophilin / FKBP-type peptidyl-prolyl cis-trans isomerase family protein [Arabidopsis thaliana] [NCBI NR]
  • gi|12247991|gb|AAG50087.1|AF334381_1 unknown protein [Arabidopsis thaliana] [NCBI NR]
  • Probable FKBP-type peptidyl-prolyl cis-trans isomerase 5, chloroplastic OS=Arabidopsis thaliana GN=At1g18170 PE=1 SV=1 [Swiss-Prot]
  • Peptidyl-prolyl cis-trans isomerase FKBP17-2, chloroplastic OS=Arabidopsis thaliana GN=FKBP17-2 PE=1 SV=1 [Swiss-Prot]
  • (Q9LDY5) T10F20.17 protein (T10O22.14) (Putative FKBP-type peptidyl-prolyl cis-trans isomerase protein) (Putative FK506-binding protein) [athaliana3702.FASTAC.txt]
  • unknown protein [Arabidopsis thaliana]gi|21593730|gb|AAM65697.1| putative FK506-binding protein [Arabidopsis thaliana]gi|8671768|gb|AAF78374.1| T10O22.14 [Arabidopsis thaliana]gi|18394580|ref|NP_564048.1| immunophilin / FKBP-type peptidyl-prolyl cis-tr [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Immunophilin [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | immunophilin / FKBP-type peptidyl-prolyl cis-trans isomerase family protein | chr1:6254284-6255500 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • putative FK506-binding protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • FK506 binding / peptidyl-prolyl cis-trans isomerase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • unknown protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • Contains weak similarity to immunophilin FKBP46 from Spodoptera frugiperda gb|U15038 and contains a FKBP-type peptidyl-prolyl cis-trans isomerase PF|00254 domain. ESTs gb|T42383, gb|N38271, gb|R90399, gb|AA605386, gb|AA394960 come from this gene. [Arabid [nr-271106-contam.fasta]
  • T10O22.14 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | FKBP-like peptidyl-prolyl cis-trans isomerase family protein | chr1:6254291-6255507 FORWARD LENGTH=247 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 247 amino acids

    Gene Ontology:
    Cellular Component: chloroplast [IDA]
    chloroplast thylakoid membrane [IDA]
    Biological Process: protein folding [IEA]
    Molecular Function: peptidyl-prolyl cis-trans isomerase activity [ISS]
    FK506 binding [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MANLFTATAP FLSLSKPFTK TASYHQCYAS SSNPPEPESS SPPPPPPPPQ PLASQQKRKK  60
   61 NVETTDWVAS SLTRRFGIGA GLAWAGFLAF GVISEQIKTR IEVSQEVANT RDVEEEKEIV 120
  121 LPNGIRYYDQ RVGGGATPRA GDLVVIDLKG QVQGTGQVFV DTFGTKDKKK MKPLALVVGS 180
  181 KPYSKGLCEG IDYVLRSMKA GGKRRVIVPP SLGFGVDGAE LESGLQIPPN ASLEYIVEID 240
  241 RVSIAPA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..247] PSI-BLAST 43.30103 FKBP51, C-terminal domain; FKBP51, N-terminal domains

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  0.355223926248969 bayes_pls_golite062009
  • isomerase activity
    		•  0.11136303327967 bayes_pls_golite062009
  • cis-trans isomerase activity
    		•  0.0710660189922594 bayes_pls_golite062009
  • peptidyl-prolyl cis-trans isomerase activity
    		•  0.0709473849313795 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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