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View Structure Prediction Details

Protein: FK172_ARATH
Organism: Arabidopsis thaliana
Length: 247 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FK172_ARATH.

Description E-value Query
Range
Subject
Range
gi|53797045 - ref|ZP_00357923.1| COG0545: FKBP-type peptidyl-prolyl cis-trans isomerases 1 [Chloroflexus aurantiac...
gi|222448091, gi... - gi|222524212|ref|YP_002568683.1| peptidylprolyl isomerase FKBP-type [Chloroflexus sp. Y-400-fl], gi|...
gi|163667727, gi... - gi|76261334|ref|ZP_00768948.1| Peptidylprolyl isomerase, FKBP-type [Chloroflexus aurantiacus J-10-fl...
210.0 [0..6] [243..1]

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Predicted Domain #1
Region A:
Residues: [1-247]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MANLFTATAP FLSLSKPFTK TASYHQCYAS SSNPPEPESS SPPPPPPPPQ PLASQQKRKK  60
   61 NVETTDWVAS SLTRRFGIGA GLAWAGFLAF GVISEQIKTR IEVSQEVANT RDVEEEKEIV 120
  121 LPNGIRYYDQ RVGGGATPRA GDLVVIDLKG QVQGTGQVFV DTFGTKDKKK MKPLALVVGS 180
  181 KPYSKGLCEG IDYVLRSMKA GGKRRVIVPP SLGFGVDGAE LESGLQIPPN ASLEYIVEID 240
  241 RVSIAPA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 43.30103
Match: 1kt1A
Description: FKBP51, C-terminal domain; FKBP51, N-terminal domains
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.355223926248969 bayes_pls_golite062009
isomerase activity 0.11136303327967 bayes_pls_golite062009
cis-trans isomerase activity 0.0710660189922594 bayes_pls_golite062009
peptidyl-prolyl cis-trans isomerase activity 0.0709473849313795 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle