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Protein Overview: gi|11281345, gi|...

General Information:
Name(s) found: gi|7327824 [NCBI NR]
gi|20148493 [NCBI NR]
gi|17065566 [NCBI NR]
gi|15241023 [NCBI NR]
gi|11281345 [NCBI NR]
Description(s) found:
Found 14 descriptions.
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  • gi|7327824|emb|CAB82281.1| light-inducible protein ATLS1 [Arabidopsis thaliana] [NCBI NR]
  • gi|20148493|gb|AAM10137.1| light-inducible protein ATLS1 [Arabidopsis thaliana] [NCBI NR]
  • gi|17065566|gb|AAL32937.1| light-inducible protein ATLS1 [Arabidopsis thaliana] [NCBI NR]
  • gi|15241023|ref|NP_195785.1| macrophage migration inhibitory factor family protein / MIF family protein [Arabidopsis thaliana] [NCBI NR]
  • pir||T48186 light-inducible protein ATLS1 - Arabidopsis thaliana [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 115 amino acids

    Gene Ontology:
    Cellular Component: chloroplast [IDA]
    Biological Process: inflammatory response [ISS]
    response to other organism [ISS]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPCLNLSTNV NLDGVDTSSI LSEASSTVAK IIGKPENYVM IVLKGSVPMS FGGTEDPAAY  60
   61 GELVSIGGLN ADVNKKLSAA VSAILETKLS VPKSRFFLKF YDTKGSFFGW NGATL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..115] PSI-BLAST 51.0 Microphage migration inhibition factor (MIF)

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • phenylpyruvate tautomerase activity
    		•  3.84932786282501 bayes_pls_golite062009
  • cytokine activity
    		•  2.80410252537768 bayes_pls_golite062009
  • intramolecular oxidoreductase activity
    		•  2.17252244354636 bayes_pls_golite062009
  • binding
    		•  1.9717928129965 bayes_pls_golite062009
  • receptor binding
    		•  1.79096938850925 bayes_pls_golite062009
  • protein binding
    		•  1.70051621352839 bayes_pls_golite062009
  • catalytic activity
    		•  0.836951613125537 bayes_pls_golite062009
  • isomerase activity
    		•  0.804529932513639 bayes_pls_golite062009
  • intramolecular oxidoreductase activity, transposing C=C bonds
    		•  0.452407074010503 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle