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Protein Overview: gi|3342551, gi|4...

General Information:
Name(s) found: gi|42571165 [NCBI NR]
gi|3894196 [NCBI NR]
gi|3342551 [NCBI NR]
gi|25408738 [NCBI NR]
Description(s) found:
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  • gi|42571165|ref|NP_973656.1| M17 [Arabidopsis thaliana] [NCBI NR]
  • gi|3894196|gb|AAC78545.1| late embryogenesis abundant M17 protein [Arabidopsis thaliana] [NCBI NR]
  • gi|3342551|gb|AAC27641.1| late-embryogenesis abundant M17 protein [Arabidopsis thaliana] [NCBI NR]
  • pir||G84839 late embryogenesis abundant M17 protein [imported] - Arabidopsis thaliana [NCBI NR]
  • (Q9S7S3) Late embryogenesis abundant M17 protein [athaliana3702.FASTAC.txt]
  • late embryogenesis abundant M17 protein [Arabidopsis thaliana]gi|3342551|gb|AAC27641.1| late-embryogenesis abundant M17 protein [Arabidopsis thaliana]gi|25408738|pir||G84839 late embryogenesis abundant M17 protein [imported] - Arabidopsis thalianagi|42 [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Glycine-rich protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: ATM17, M17 | M17 | chr2:17213619-17214570 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • M17 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • late-embryogenesis abundant M17 protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • late embryogenesis abundant M17 protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: M17, ATM17 | glycine-rich protein / late embryogenesis abundant protein (M17) | chr2:17206541-17207492 FORWARD LENGTH=280 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • Glycine-rich protein / late embryogenesis abundant protein (M17) OS=Arabidopsis thaliana GN=M17 PE=4 SV=1 [ARATH-contam.fasta]
  • Late embryogenesis abundant M17 protein OS=Arabidopsis thaliana GN=M17 PE=4 SV=1 [ARATH.fasta.20160308]
    • Organism: Arabidopsis thaliana
    Length: 280 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: embryonic development [TAS]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGNLKSLVLL ALLFSFSVAV FANTSNDATH DEVKPSTEAT HAIEAQKHDG KPQIAEAQVE  60
   61 ANDPVVEPQQ DWGGRGGCRW GCCGGWWRGR CRYCCRSQAE ASEVVETVEP NDVEPQQGGR 120
  121 GGGGGGGGGR GGCRWGCCGG WWRGRCRYCC RSQAEASEVV ETVEPNDVEP QQGGRGGGGG 180
  181 GGGGRGGCRW GCCGGWWRGR CRYCCRSQAE ASEVVETVEP NDVEPQQGGR GGGGGGGGGR 240
  241 GGCRWGCCGG WWRGRCRYCC RSQAEANEVV ETVEAQQAKP

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..120] MSA 1.00396 View MSA. No confident structure predictions are available.
    2 View Details [121..280] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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