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View Structure Prediction Details

Protein: gi|3342551, gi|4...
Organism: Arabidopsis thaliana
Length: 280 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|3342551, gi|4....

Description E-value Query
Range
Subject
Range
gi|22135793, gi|... - gi|30688591|ref|NP_181659.2| M17 [Arabidopsis thaliana], gi|22135793|gb|AAM91083.1| At2g41260/F13H10...
217.0 [0..1] [225..1]

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Predicted Domain #1
Region A:
Residues: [1-120]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGNLKSLVLL ALLFSFSVAV FANTSNDATH DEVKPSTEAT HAIEAQKHDG KPQIAEAQVE  60
   61 ANDPVVEPQQ DWGGRGGCRW GCCGGWWRGR CRYCCRSQAE ASEVVETVEP NDVEPQQGGR 120
  121 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [121-280]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GGGGGGGGGR GGCRWGCCGG WWRGRCRYCC RSQAEASEVV ETVEPNDVEP QQGGRGGGGG  60
   61 GGGGRGGCRW GCCGGWWRGR CRYCCRSQAE ASEVVETVEP NDVEPQQGGR GGGGGGGGGR 120
  121 GGCRWGCCGG WWRGRCRYCC RSQAEANEVV ETVEAQQAKP 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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