Protein Overview: DNJ19_ARATH

General Information:
Name(s) found:	DNJ19_ARATH [Swiss-Prot]
Description(s) found: Found 18 descriptions. SHOW ALL	DnaJ protein ERDJ3B OS=Arabidopsis thaliana GN=ERDJ3B PE=1 SV=1 [Swiss-Prot]
Organism:	Arabidopsis thaliana
Length:	346 amino acids
Gene Ontology:
Cellular Component:	endoplasmic reticulum lumen [IDA] plasma membrane [IDA]
Biological Process:	protein folding [ISS]
Molecular Function:	heat shock protein binding [IEA] unfolded protein binding [IEA]

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAIRWSELCI VLFALSYAIC VLAGKSYYDV LQVPKGASDE QIKRAYRKLA LKYHPDKNQG  60
   61 NEEATRKFAE INNAYEVLSD EEKREIYNKY GEEGLKQFSA NGGRGGGGGG MNMQDIFSSF 120
  121 FGGGSMEEEE KVVKGDDVIV ELEATLEDLY MGGSMKVWRE KNVIKPAPGK RKCNCRNEVY 180
  181 HRQIGPGMFQ QMTEQVCDKC PNVKYEREGY FVTVDIEKGM KDGEEVSFYE DGEPILDGDP 240
  241 GDLKFRIRTA PHARFRRDGN DLHMNVNITL VEALVGFEKS FKHLDDHEVD ISSKGITKPK 300
  301 EVKKFKGEGM PLHYSTKKGN LFVTFEVLFP SSLTDDQKKK IKEVFA

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

SHOWING SINGLE HITS. [ Hide Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

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No microscopy data found in the PDR for this protein.

Protein Structure Data

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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#		Region(s)	Method	Confidence	Match Description
1	View Details	[1..134]	PSI-BLAST	25.522879	NMR STRUCTURE OF THE J-DOMAIN (RESIDUES 2-76) IN THE ESCHERICHIA COLI N-TERMINAL FRAGMENT (RESIDUES 2-108) OF THE MOLECULAR CHAPERONE DNAJ, 20 STRUCTURES
2	View Details	[135..346]	PSI-BLAST	44.221849	The crystal structure of Hsp40 Ydj1

Functions predicted (by domain):

#

Gene Ontology predictions

1

Term	Confidence	Notes
unfolded protein binding	3.04403163860617	bayes_pls_golite062009
binding	2.63138872417193	bayes_pls_golite062009
heat shock protein binding	2.17994194200939	bayes_pls_golite062009
transcription regulator activity	1.91297632253219	bayes_pls_golite062009
nucleic acid binding	1.6342534817623	bayes_pls_golite062009
chaperone binding	1.61155546076854	bayes_pls_golite062009
protein binding	1.60937254813642	bayes_pls_golite062009
DNA binding	1.55234338199368	bayes_pls_golite062009
Hsp70 protein binding	0.541755903922701	bayes_pls_golite062009
transferase activity	0.240656521918556	bayes_pls_golite062009
catalytic activity	0.106988907594358	bayes_pls_golite062009
phosphotransferase activity, alcohol group as acceptor	0.0276971914937192	bayes_pls_golite062009

2

Term	Confidence	Notes
binding	2.7298921704023	bayes_pls_golite062009
protein disulfide isomerase activity	2.4409950647303	bayes_pls_golite062009
intramolecular oxidoreductase activity, transposing S-S bonds	2.4409950647303	bayes_pls_golite062009
intramolecular oxidoreductase activity, interconverting keto- and enol-groups	2.23398279564144	bayes_pls_golite062009
unfolded protein binding	2.04158808514315	bayes_pls_golite062009
protein binding	1.57926302986794	bayes_pls_golite062009
catalytic activity	0.276917867171685	bayes_pls_golite062009

Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

Philius Transmembrane Prediction:

[View Details]

Source: Reynolds et al. 2008. Manuscript submitted

Philius confidence legend

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