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Protein Overview: GH312_ARATH

General Information:
Name(s) found: GH312_ARATH [Swiss-Prot]
Description(s) found:
Found 12 descriptions.
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  • 4-substituted benzoates-glutamate ligase GH3.12 OS=Arabidopsis thaliana GN=GH3.12 PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 575 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: defense response to bacterium, incompatible interaction [IMP]
    salicylic acid mediated signaling pathway [IEP]
    detection of fungus [IMP]
    defense response [IMP]
    defense response to bacterium [IEP][IMP]
    benzoate metabolic process [IDA]
    response to auxin stimulus [ISS]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKPIFDINET FEKQLKDLTS NVKSIQDNLL EEIITPNTKT EYLQRFLIDR FDKELFKKNV  60
   61 PIVSYEDIKP YLDRVVNGES SDVISARTIT GFLLSSGTSG GAQKMMPWNN KYLDNLTFIY 120
  121 DLRMQVITKH VKGVEEGKGM MFLFTKQESM TPSGLPARVA TSSYFKSDYF KNRPSNWYYS 180
  181 YTSPDEVILC PNNTESLYCH LLCGLVQRDE VVRTGSIFAS VMVRAIEVLK NSWEELCSNI 240
  241 RSGHLSNWVT DLGCQNSVSL VLGGPRPELA DTIEEICNQN SWKGIVKRLW PNTKYIETVV 300
  301 TGSMGQYVPM LNYYCNDLPL VSTTYGSSET TFGINLDPLC KPEDVSYTFM PNMSYFEFIP 360
  361 MDGGDKNDVV DLEDVKLGCT YEPVVTNFAG LYRMRVGDIV LVTGFYNNAP QFKFVRRENV 420
  421 VLSIDSDKTN EEDLFKAVSQ AKLVLESSGL DLKDFTSYAD TSTFPGHYVV YLEVDTKEGE 480
  481 EKETAQFELD EEALSTCCLV MEESLDNVYK RCRFKDGSIG PLEIRVVRQG TFDSLMDFFI 540
  541 SQGASTGQYK TPRCIKSGKA LQVLETCVVA KFFSI

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..575] FFAS03 3.48 Phenylalanine activating domain of gramicidin synthetase 1

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  1.1635513199224 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle