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Protein Overview: LECT5_ARATH

General Information:
Name(s) found: LECT5_ARATH [Swiss-Prot]
Description(s) found:
Found 15 descriptions.
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  • Lectin-like protein At3g16530 OS=Arabidopsis thaliana GN=At3g16530 PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 276 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDA]
    cell wall [IDA]
    apoplast [IDA]
    plant-type cell wall [IDA]
    Biological Process: response to chitin [IEP]
    Molecular Function: sugar binding [IEA]
    carbohydrate binding [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQIHKLCFLV LFLANAAFAV KFNFDSFDGS NLLFLGDAEL GPSSDGVSRS GALSMTRDEN  60
   61 PFSHGQGLYI NQIPFKPSNT SSPFSFETSF TFSITPRTKP NSGQGFAFII TPEADNSGAS 120
  121 DGGYLGILNK TNDGKPENHI LAIEFDTFQN KEFLDISGNH VGVNINSMTS LVAEKAGYWV 180
  181 QTRVGKRKVW SFKDVNLSSG ERFKAWVEFR NKDSTITVTL APENVKKPKR ALIEAPRVLN 240
  241 EVLLQNMYAG FAGSMGRAVE RHDIWSWSFE NAAKNN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..276] PSI-BLAST 63.045757 Phytohemagglutinin-L, PHA-L, also arcelin

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  1.49960529341364 bayes_pls_golite062009
  • sugar binding
    		•  1.2933880998245 bayes_pls_golite062009
  • monosaccharide binding
    		•  0.641323484799369 bayes_pls_golite062009
  • protein binding
    		•  0.501917973797597 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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