YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	LECT5_ARATH
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQIHKLCFLV LFLANAAFAV KFNFDSFDGS NLLFLGDAEL GPSSDGVSRS GALSMTRDEN  60
   61 PFSHGQGLYI NQIPFKPSNT SSPFSFETSF TFSITPRTKP NSGQGFAFII TPEADNSGAS 120
  121 DGGYLGILNK TNDGKPENHI LAIEFDTFQN KEFLDISGNH VGVNINSMTS LVAEKAGYWV 180
  181 QTRVGKRKVW SFKDVNLSSG ERFKAWVEFR NKDSTITVTL APENVKKPKR ALIEAPRVLN 240
  241 EVLLQNMYAG FAGSMGRAVE RHDIWSWSFE NAAKNN

Type	Start	End	Confidence
Signal Peptide	1	19	0.99
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	276	0.99