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Protein Overview: SKU5_ARATH

General Information:
Name(s) found: SKU5_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|7433001|pir||T07634 pollen-specific protein homolog T1P17.10 - Arabidopsis thaliana [NCBI NR]
  • gi|7267944|emb|CAB78285.1| putative pollen-specific protein [Arabidopsis thaliana] [NCBI NR]
  • gi|4725941|emb|CAB41712.1| putative pollen-specific protein [Arabidopsis thaliana] [NCBI NR]
  • gi|38258655|sp|Q9SU40.1|SKU5_ARATH RecName: Full=Putative monocopper oxidase; AltName: Full=Skewed roots; Flags: Precursor [NCBI NR]
  • gi|18158154|gb|AAL62306.1|AF439406_1 multi-copper oxidase-related protein [Arabidopsis thaliana] [NCBI NR]
  • gi|15234551|ref|NP_192979.1| SKU5; copper ion binding / oxidoreductase [Arabidopsis thaliana] [NCBI NR]
  • Monocopper oxidase-like protein SKU5 OS=Arabidopsis thaliana GN=SKU5 PE=1 SV=1 [Swiss-Prot]
  • (Q9SU40) Putative monocopper oxidase precursor (Skewed roots) [athaliana3702.FASTAC.txt]
  • multi-copper oxidase-related protein [Arabidopsis thaliana]gi|4725941|emb|CAB41712.1| putative pollen-specific protein [Arabidopsis thaliana]gi|7267944|emb|CAB78285.1| putative pollen-specific protein [Arabidopsis thaliana]gi|38258655|sp|Q9SU40|SKU5_AR [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Putative monocopper oxidase precursor [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: SKU5 | SKU5 (skewed 5); copper ion binding | chr4:7349938-7352865 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • multi-copper oxidase-related protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • Putative monocopper oxidase precursor (Skewed roots) [nr-271106-contam.fasta]
  • putative pollen-specific protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • SKU5; copper ion binding [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: SKU5 | Cupredoxin superfamily protein | chr4:7349941-7352868 REVERSE LENGTH=587 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 587 amino acids

    Gene Ontology:
    Cellular Component: cell wall [IDA]
    membrane [IDA]
    apoplast [IDA]
    plant-type cell wall [IDA]
    plasma membrane [IDA]
    anchored to plasma membrane [IDA]
    anchored to membrane [TAS]
    Biological Process: cell tip growth [IMP]
    Molecular Function: copper ion binding [IEA][ISS]
    oxidoreductase activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDLFKILLLV FFVNISFCFA ADPYSFYNFE VSYITASPLG VPQQVIAING KFPGPTINVT  60
   61 TNENLVVNVR NKLDEGLLLH WNGIQQRRVS WQDGVLGTNC PIPPKWNWTY EFQVKDQIGS 120
  121 FFYFPSLHFQ RASGGFGSFV VNPRAIIPVP FSTPDGDITV TIGDWYIRNH TALRKALDDG 180
  181 KDLGMPDGVL INGKGPYRYN DTLVADGIDF ETITVHPGKT YRLRVSNVGI STSLNFRIQG 240
  241 HNLVLAESEG SYTVQQNYTS LDIHVGQSYS FLVTMDQNAS SDYYIVASAR VVNETIWRRV 300
  301 TGVGILKYTN SKGKAKGQLP PGPQDEFDKT FSMNQARSIR WNVSASGARP NPQGSFKYGS 360
  361 INVTDVYVLR NMPPVTISGK RRTTLNGISF KNPSTPIRLA DKLKVKDVYK LDFPKRPLTG 420
  421 PAKVATSIIN GTYRGFMEVV LQNNDTKMQS YHMSGYAFFV VGMDYGEWTE NSRGTYNKWD 480
  481 GIARSTIQVY PGAWSAILIS LDNPGAWNLR TENLDSWYLG QETYVRVVNP DENNKTEFGH 540
  541 PDNVLYCGAL SKLQKPQKVS SSASKSIGFT SLSMVVMALV MMMMLQH

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..587] PSI-BLAST 91.0 Ascorbate oxidase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • hydrogen ion transmembrane transporter activity
    		•  5.98463819317772 bayes_pls_golite062009
  • cation transmembrane transporter activity
    		•  4.80679334235027 bayes_pls_golite062009
  • ion transmembrane transporter activity
    		•  4.70382790500795 bayes_pls_golite062009
  • inorganic cation transmembrane transporter activity
    		•  4.35501871300326 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
    		•  4.30470923318097 bayes_pls_golite062009
  • monovalent inorganic cation transmembrane transporter activity
    		•  3.4840258390283 bayes_pls_golite062009
  • transition metal ion transmembrane transporter activity
    		•  2.9428517783106 bayes_pls_golite062009
  • metal ion transmembrane transporter activity
    		•  2.82570802206273 bayes_pls_golite062009
  • transporter activity
    		•  2.75690053147562 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  2.67027550825653 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  2.42871678736924 bayes_pls_golite062009
  • di-, tri-valent inorganic cation transmembrane transporter activity
    		•  1.88441243755534 bayes_pls_golite062009
  • copper ion binding
    		•  1.67952903413921 bayes_pls_golite062009
  • oxidoreductase activity
    		•  1.49034416929059 bayes_pls_golite062009
  • iron ion transmembrane transporter activity
    		•  1.17954317549442 bayes_pls_golite062009
  • copper ion transmembrane transporter activity
    		•  0.96418286916503 bayes_pls_golite062009
  • ferroxidase activity
    		•  0.948067553932463 bayes_pls_golite062009
  • oxidoreductase activity, oxidizing metal ions, oxygen as acceptor
    		•  0.948067553932463 bayes_pls_golite062009
  • binding
    		•  0.89678532754402 bayes_pls_golite062009
  • oxidoreductase activity, oxidizing metal ions
    		•  0.84656625234389 bayes_pls_golite062009
  • transition metal ion binding
    		•  0.530231637345107 bayes_pls_golite062009
  • catalytic activity
    		•  0.363071622766357 bayes_pls_golite062009
  • active transmembrane transporter activity
    		•  0.269767937058687 bayes_pls_golite062009
  • heme-copper terminal oxidase activity
    		•  0.233785530643069 bayes_pls_golite062009
  • cytochrome-c oxidase activity
    		•  0.0760986706873972 bayes_pls_golite062009
  • oxidoreductase activity, acting on heme group of donors, oxygen as acceptor
    		•  0.0760986706873972 bayes_pls_golite062009
  • oxidoreductase activity, acting on heme group of donors
    		•  0.0760986706873972 bayes_pls_golite062009
  • protein binding
    		•  0.0393017564630179 bayes_pls_golite062009
  • primary active transmembrane transporter activity
    		•  0.0246677473353576 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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