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Protein Overview: SCC12_ARATH

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:


[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

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No microscopy data found in the PDR for this protein.

Protein Structure Data

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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#   Region(s) Method Confidence Match Description
1 View Details [1..106] Pfam 52.387216 No description for PF04825.4 was found. No confident structure predictions are available.
2 View Details [107..345] deduced N/A No confident structure predictions are available.
3 View Details [346..591] MSA 4.259996 View MSA. No confident structure predictions are available.
4 View Details [592..726] deduced N/A No confident structure predictions are available.
5 View Details [727..810] PSI-BLAST 3.522879 Sc Smc1hd:Scc1-C complex, ATPgS

Functions predicted (by domain):

# Gene Ontology predictions
1 No functions predicted.
2 No functions predicted.
3 No functions predicted.
4 No functions predicted.
Term Confidence Notes
  • binding
  • 0.835523092977445 bayes_pls_golite062009
  • transcription regulator activity
  • 0.4843036104266 bayes_pls_golite062009
  • nucleic acid binding
  • 0.37117756729668 bayes_pls_golite062009
  • DNA binding
  • 0.3118855114645 bayes_pls_golite062009

    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.96

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle