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Protein Overview: SRS31_ARATH

General Information:
Name(s) found: SRS31_ARATH [Swiss-Prot]
Description(s) found:
Found 14 descriptions.
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  • Serine/arginine-rich splicing factor RS31 OS=Arabidopsis thaliana GN=RS31 PE=1 SV=2 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 264 amino acids

    Gene Ontology:
    Cellular Component: nuclear speck [IDA]
    spliceosomal complex [TAS]
    Biological Process: RNA splicing [NAS]
    nuclear mRNA splicing, via spliceosome [IDA]
    Molecular Function: nucleic acid binding [IEA]
    nucleotide binding [IEA]
    RNA binding [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRPVFVGNFE YETRQSDLER LFDKYGRVDR VDMKSGYAFV YFEDERDAED AIRKLDNFPF  60
   61 GYEKRRLSVE WAKGERGRPR GDAKAPSNLK PTKTLFVINF DPIRTKEHDI EKHFEPYGKV 120
  121 TNVRIRRNFS FVQFETQEDA TKALEATQRS KILDRVVSVE YALKDDDERD DRNGGRSPRR 180
  181 SLSPVYRRRP SPDYGRRPSP GQGRRPSPDY GRARSPEYDR YKGPAAYERR RSPDYGRRSS 240
  241 DYGRQRSPGY DRYRSRSPVP RGRP

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..168] PSI-BLAST 35.69897 Crystal Structure of UP1 Complexed With d(TAGG(6MI)TTAGGG): A Human Telomeric Repeat Containing 6-methyl-8-(2-deoxy-beta-ribofuranosyl)isoxanthopteridine (6MI)
    2 View Details [169..264] deduced N/A No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.950788308762215 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.29562225149076 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle