| General Information: |
|
| Name(s) found: |
RPB1_ARATH
[Swiss-Prot]
|
| Description(s) found:
Found 13 descriptions. SHOW ALL |
|
| Organism: | Arabidopsis thaliana |
| Length: | 1840 amino acids |
Gene Ontology: |
|
| Cellular Component: |
nucleus
[ISS]
chloroplast [IDA] vacuole [IDA] DNA-directed RNA polymerase II, core complex [IPI] |
| Biological Process: |
transcription
[IEA][ISS]
transcription from RNA polymerase II promoter [IEA] |
| Molecular Function: |
DNA binding
[ISS]
DNA-directed RNA polymerase activity [ISS] |
| Sequence: |
|
| Sequence: [PDR BLAST] [ProtParam] |
1 11 21 31 41 51
| | | | | |
1 MDTRFPFSPA EVSKVRVVQF GILSPDEIRQ MSVIHVEHSE TTEKGKPKVG GLSDTRLGTI 60
61 DRKVKCETCM ANMAECPGHF GYLELAKPMY HVGFMKTVLS IMRCVCFNCS KILADEVCRS 120
121 LFRQAMKIKN PKNRLKKILD ACKNKTKCDG GDDIDDVQSH STDEPVKKSR GGCGAQQPKL 180
181 TIEGMKMIAE YKIQRKKNDE PDQLPEPAER KQTLGADRVL SVLKRISDAD CQLLGFNPKF 240
241 ARPDWMILEV LPIPPPPVRP SVMMDATSRS EDDLTHQLAM IIRHNENLKR QEKNGAPAHI 300
301 ISEFTQLLQF HIATYFDNEL PGQPRATQKS GRPIKSICSR LKAKEGRIRG NLMGKRVDFS 360
361 ARTVITPDPT INIDELGVPW SIALNLTYPE TVTPYNIERL KELVDYGPHP PPGKTGAKYI 420
421 IRDDGQRLDL RYLKKSSDQH LELGYKVERH LQDGDFVLFN RQPSLHKMSI MGHRIRIMPY 480
481 STFRLNLSVT SPYNADFDGD EMNMHVPQSF ETRAEVLELM MVPKCIVSPQ ANRPVMGIVQ 540
541 DTLLGCRKIT KRDTFIEKDV FMNTLMWWED FDGKVPAPAI LKPRPLWTGK QVFNLIIPKQ 600
601 INLLRYSAWH ADTETGFITP GDTQVRIERG ELLAGTLCKK TLGTSNGSLV HVIWEEVGPD 660
661 AARKFLGHTQ WLVNYWLLQN GFTIGIGDTI ADSSTMEKIN ETISNAKTAV KDLIRQFQGK 720
721 ELDPEPGRTM RDTFENRVNQ VLNKARDDAG SSAQKSLAET NNLKAMVTAG SKGSFINISQ 780
781 MTACVGQQNV EGKRIPFGFD GRTLPHFTKD DYGPESRGFV ENSYLRGLTP QEFFFHAMGG 840
841 REGLIDTAVK TSETGYIQRR LVKAMEDIMV KYDGTVRNSL GDVIQFLYGE DGMDAVWIES 900
901 QKLDSLKMKK SEFDRTFKYE IDDENWNPTY LSDEHLEDLK GIRELRDVFD AEYSKLETDR 960
961 FQLGTEIATN GDSTWPLPVN IKRHIWNAQK TFKIDLRKIS DMHPVEIVDA VDKLQERLLV1020
1021 VPGDDALSVE AQKNATLFFN ILLRSTLASK RVLEEYKLSR EAFEWVIGEI ESRFLQSLVA1080
1081 PGEMIGCVAA QSIGEPATQM TLNTFHYAGV SAKNVTLGVP RLREIINVAK RIKTPSLSVY1140
1141 LTPEASKSKE GAKTVQCALE YTTLRSVTQA TEVWYDPDPM STIIEEDFEF VRSYYEMPDE1200
1201 DVSPDKISPW LLRIELNREM MVDKKLSMAD IAEKINLEFD DDLTCIFNDD NAQKLILRIR1260
1261 IMNDEGPKGE LQDESAEDDV FLKKIESNML TEMALRGIPD INKVFIKQVR KSRFDEEGGF1320
1321 KTSEEWMLDT EGVNLLAVMC HEDVDPKRTT SNHLIEIIEV LGIEAVRRAL LDELRVVISF1380
1381 DGSYVNYRHL AILCDTMTYR GHLMAITRHG INRNDTGPLM RCSFEETVDI LLDAAAYAET1440
1441 DCLRGVTENI MLGQLAPIGT GDCELYLNDE MLKNAIELQL PSYMDGLEFG MTPARSPVSG1500
1501 TPYHEGMMSP NYLLSPNMRL SPMSDAQFSP YVGGMAFSPS SSPGYSPSSP GYSPTSPGYS1560
1561 PTSPGYSPTS PGYSPTSPTY SPSSPGYSPT SPAYSPTSPS YSPTSPSYSP TSPSYSPTSP1620
1621 SYSPTSPSYS PTSPSYSPTS PAYSPTSPAY SPTSPAYSPT SPSYSPTSPS YSPTSPSYSP1680
1681 TSPSYSPTSP SYSPTSPAYS PTSPGYSPTS PSYSPTSPSY GPTSPSYNPQ SAKYSPSIAY1740
1741 SPSNARLSPA SPYSPTSPNY SPTSPSYSPT SPSYSPSSPT YSPSSPYSSG ASPDYSPSAG1800
1801 YSPTLPGYSP SSTGQYTPHE GDKKDKTGKK DASKDDKGNP |
NOT SHOWING SINGLE HITS. [ Show Single Hits ]
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Domains predicted:
| # | Region(s) | Method | Confidence | Match Description | |
| 1 | View Details | [1..1582] |  |
1000.0 | RBP1 |
| 2 | View Details | [1583..1840] | |
8.221849 | No description for 1y0fA was found. |
| Protein predicted to be: | GLOBULAR (No transmembrane regions or signal peptide) |
| Confidence of classification: | 0.99 |
Source: Reynolds et al. (2008)