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Protein Overview: RL4A_ARATH

General Information:
Name(s) found: RL4A_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|6682241|gb|AAF23293.1|AC016661_18 putative 60S ribosomal protein L1 [Arabidopsis thaliana] [NCBI NR]
  • gi|30725664|gb|AAP37854.1| At3g09630 [Arabidopsis thaliana] [NCBI NR]
  • gi|27311665|gb|AAO00798.1| putative 60S ribosomal protein L1 [Arabidopsis thaliana] [NCBI NR]
  • gi|17369604|sp|Q9SF40.1|RL4A_ARATH RecName: Full=60S ribosomal protein L4-1; Short=L1 [NCBI NR]
  • gi|15982715|gb|AAL09727.1| AT3g09630/F11F8_22 [Arabidopsis thaliana] [NCBI NR]
  • gi|15232723|ref|NP_187574.1| 60S ribosomal protein L4/L1 (RPL4A) [Arabidopsis thaliana] [NCBI NR]
  • (Q9SF40) 60S ribosomal protein L4-2 (L1) [Swiss-Prot]
  • 60S ribosomal protein L4-1 OS=Arabidopsis thaliana GN=RPL4A PE=2 SV=1 [Swiss-Prot]
  • At3g09630 [Arabidopsis thaliana]gi|27311665|gb|AAO00798.1| putative 60S ribosomal protein L1 [Arabidopsis thaliana]gi|15982715|gb|AAL09727.1| AT3g09630/F11F8_22 [Arabidopsis thaliana]gi|6682241|gb|AAF23293.1| putative 60S ribosomal protein L1 [Arabidop [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 60S ribosomal protein L4-2 [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | 60S ribosomal protein L4/L1 (RPL4A) | chr3:2953818-2955449 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • 60S ribosomal protein L4-1 (L1) [nr-271106-contam.fasta]
  • putative 60S ribosomal protein L1 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • structural constituent of ribosome [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • AT3g09630/F11F8_22 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • At3g09630 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | Ribosomal protein L4/L1 family | chr3:2953813-2955444 FORWARD LENGTH=406 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 406 amino acids

    Gene Ontology:
    Cellular Component: chloroplast [IDA]
    cytosolic ribosome [IDA]
    cell wall [IDA]
    membrane [IDA]
    cytosolic large ribosomal subunit [IDA]
    nucleolus [IDA]
    ribosome [ISS]
    vacuole [IDA]
    plasma membrane [IDA]
    Biological Process: translation [IEA][ISS]
    Molecular Function: structural constituent of ribosome [IEA][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAAAARPLV TIQTLDGDMS TDQSSTVVLP DVMTAPVRPD IVNFVHAQIS NNSRQPYAVS  60
   61 KKAGHQTSAE SWGTGRAVSR IPRVPGGGTH RAGQAAFGNM CRGGRMFAPT KIWRRWHRRV 120
  121 NVNMKRHAIV SAIAATAVPA LVMARGHKIE NVPEMPLVVS DSAEAVEKTS AAIKVLKQIG 180
  181 AYDDAEKAKN SIGIRPGKGK MRNRRYISRK GPLVVYGTEG SKIVKAFRNL PGVELCHVER 240
  241 LNLLKLAPGG HLGRFVIWTK SAFEKLESIY GSFEKPSEKK KGYVLPRAKM VNADLARIIN 300
  301 SDEIQSVVNP IKKDAKRAVL KKNPLKNLNV MLKLNPYAKT AKRMSLLAEA QRVKAKKEKL 360
  361 AKKRKTVTKE EALAIKAAGK SWYKTMISDS DYTEFDNFTK WLGASQ

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..406] PSI-BLAST 93.39794 Structure of the ribosomal 80S-eEF2-sordarin complex from yeast obtained by docking atomic models for RNA and protein components into a 11.7 A cryo-EM map. This file, 1S1I, Contains 60S subunit. The 40S Ribosomal Subunit Is In File 1S1H.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
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