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Protein Overview: PSMD4_ARATH

General Information:
Name(s) found: PSMD4_ARATH [Swiss-Prot]
Description(s) found:
Found 21 descriptions.
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  • 26S proteasome non-ATPase regulatory subunit 4 homolog OS=Arabidopsis thaliana GN=RPN10 PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 386 amino acids

    Gene Ontology:
    Cellular Component: nucleus [TAS]
    proteasome regulatory particle, base subcomplex [IDA][ISS]
    membrane [IDA]
    cytosol [IDA]
    proteasome complex [IDA][TAS]
    Biological Process: response to salt stress [IMP]
    protein catabolic process [TAS]
    leaf senescence [IMP]
    pollen development [IMP]
    root hair elongation [IMP]
    response to DNA damage stimulus [IMP]
    proteasome assembly [IMP]
    response to cytokinin stimulus [IEP][IMP]
    post-embryonic root development [IMP]
    [NOT]proteasome core complex assembly [IMP]
    ubiquitin-dependent protein catabolic process [TAS]
    response to auxin stimulus [IMP]
    response to sucrose stimulus [IMP]
    response to heat [IMP]
    proteasomal ubiquitin-dependent protein catabolic process [IMP]
    response to abscisic acid stimulus [IMP]
    stamen formation [IMP]
    leaf development [IMP]
    regulation of seed germination [IMP]
    response to misfolded protein [IMP]
    Molecular Function: peptide receptor activity [IDA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVLEATMICI DNSEWMRNGD YSPSRLQAQT EAVNLLCGAK TQSNPENTVG ILTMAGKGVR  60
   61 VLTTPTSDLG KILACMHGLD VGGEINLTAA IQIAQLALKH RQNKNQRQRI IVFAGSPIKY 120
  121 EKKALEIVGK RLKKNSVSLD IVNFGEDDDE EKPQKLEALL TAVNNNDGSH IVHVPSGANA 180
  181 LSDVLLSTPV FTGDEGASGY VSAAAAAAAA GGDFDFGVDP NIDPELALAL RVSMEEERAR 240
  241 QEAAAKKAAD EAGQKDKDGD TASASQETVA RTTDKNAEPM DEDSALLDQA IAMSVGDVNM 300
  301 SEAADEDQDL ALALQMSMSG EESSEATGAG NNLLGNQAFI SSVLSSLPGV DPNDPAVKEL 360
  361 LASLPDESKR TEEEESSSKK GEDEKK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..205] PSI-BLAST 9.69897 No description for 2i6qA was found.
    2 View Details [206..386] PSI-BLAST 14.69897 Structure of S5a bound to monoubiquitin provides a model for polyubiquitin recognition


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle