| Protein: | PSMD4_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 386 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PSMD4_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
335.0 | [0..1] | [386..1] |
|
Region A: Residues: [1-205] |
1 11 21 31 41 51
| | | | | |
1 MVLEATMICI DNSEWMRNGD YSPSRLQAQT EAVNLLCGAK TQSNPENTVG ILTMAGKGVR 60
61 VLTTPTSDLG KILACMHGLD VGGEINLTAA IQIAQLALKH RQNKNQRQRI IVFAGSPIKY 120
121 EKKALEIVGK RLKKNSVSLD IVNFGEDDDE EKPQKLEALL TAVNNNDGSH IVHVPSGANA 180
181 LSDVLLSTPV FTGDEGASGY VSAAA
|
| Detection Method: |  |
| Confidence: | 9.69897 |
| Match: | 2i6qA |
| Description: | No description for 2i6qA was found. |
|
Region A: Residues: [206-386] |
1 11 21 31 41 51
| | | | | |
1 AAAAAGGDFD FGVDPNIDPE LALALRVSME EERARQEAAA KKAADEAGQK DKDGDTASAS 60
61 QETVARTTDK NAEPMDEDSA LLDQAIAMSV GDVNMSEAAD EDQDLALALQ MSMSGEESSE 120
121 ATGAGNNLLG NQAFISSVLS SLPGVDPNDP AVKELLASLP DESKRTEEEE SSSKKGEDEK 180
181 K
|
| Detection Method: | |
| Confidence: | 14.69897 |
| Match: | 1yx4A |
| Description: | Structure of S5a bound to monoubiquitin provides a model for polyubiquitin recognition |
Matching Structure (courtesy of the PDB): |
|
